TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAAAAAGCACTGTCGTTTTATATTCTTTTTGTGGTGGGTTGACCAGC
CACATTATAATTGGTCAGCAAAGCAGCAGTATATTTTTAAACTTAGTGGT
CATGGAGAATTCTGGCAGCAAGGTCAGGGTAGTTTGTGGGTTTTCTTGGA
ATTCAGTGTGGGGCAGGGTGGGGGATTTTTTCTGAGAACTGTTATTTTTG
TTATGGTTATTTTTCTTGAGAATAGCTAACATTGTTTTGGCAGCTGTAGA
CTTGGTCTGGCCATTTTGACTGTTACTATTTTAGCTTGGAAAGCCCCTTC
TAAGGGGAAGATGTCGTTCGCTCCCGAATTCACTTTGGATTCTACAAGGG
ACGAACAAGGCACTGACCCTGAGAACATGAATTACTGACATTTTCGATCT
ATTCTGTCGGCACGTTTTTTATTACCCCATCTTTCATTCGTACTTTCTTT
ACGTTATCTCCGTTTCTCTTTTCCTTCCCTCTTTTTTTCTGTTCTCTTTC
TAATCATTTTATATTTTTTTTTATATCTCTTCATTTGATCATATTTACTC
AAATTATACCACTCAACCCGAATCATCTTTCCCCCCCTTTCCTGTTTTAC
TTCTAATCCTCTTTTTTTCCGCTCTTTCTTTATTTATAAGTCTCTCCTGC
TTATCTTTTTTCTATACTTGTCTCATACCTTCTCCCTATTCCTATCTTAC
ACCCCCACACTTTTTTAATTTTCTCCCATACCTCCTTATAACTCCTACAT
CCATTTATGCTAACCTCATCCTTGTTATCGCCTTACGATTATCTAAACTG

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXATAATTTAAATAGAAGAGAAAATATA
TAGGGTGTGGTGTTTATATAAGCATTTTAGAAAAAGATCAGCTGGGTGTG
GTGGCGCATGCCTTTAATCCCAGCACTTGGGAAGCAGAGGCAGGCGGATT
TCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAG
GGCTACACAGAGAAACCCTGTCTCAAAAAAAAAAAAAAAAAATTACAAAT
TCTCACATTGTGTGAATATAGATCTCAGCTCTCCCTTCTCATTTCTTCAT
TTTTGTCCCTATTCTCAATAAGAACAGACTTCTGTGTGATCAGCTTCATT
TAAATACCTCTCTAATGCTTACCAGCTTTTTTAAAAATTGGATATTTTAT
TTATTTACATTTCAAATGTTATGACCTTTCCCAGTTTCTCTGCAAATTCC
CTATCTCGTCCCCGCCCCCTCCTTACCCTGCTTCTGGGAGGGTGCTCCCC
ATCCTACCATCTACTCCTGGCTCACTGCCCTAGCATTCCTCTACACTGGG
CATCAAGTCTTCCCTGTGACCTTGATGCTAGATAATGGCCCTTTTCTATC
TTTGAGCCTTTCCCCTAATCTCTCTTTTTGCTTCGGCTTGGGTCGGTCCG
TTGTTTTTCGTGCTCGTTTTTCTTCTTTACATTCTTTCGCGTTAGGATTA
CAATTCTTTCNGACTATACATCATATCTCGTCCTCCACCG

Query= MSMg01no473_o01.g1 MSMg01no473_o01.g1 CHROMAT_FILE:
MSMg01no473_o01.g1 PHD_FILE: MSMg01no473_o01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:08 2005
         (466 letters)



>mm_chr13_93141619_93142484
          Length = 866

 Score =  886 bits (458), Expect = 0.0
 Identities = 464/466 (99%), Gaps = 1/466 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ataatttaaatagaagagaaaatatatagggtgtggtgtttatataagcattttagaaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ataatttaaatagaagagaaaatatatagggtgtggtgtttatataagcattttagaaaa 261

                                                                       
Query: 61  agatcagctgggtgtggtggcgcatgcctttaatcccagcacttgggaagcagaggcagg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 agatcagctgggtgtggtggcgcatgcctttaatcccagcacttgggaagcagaggcagg 321

                                                                       
Query: 121 cggatttctgagttcgaggccagcctggtctacagagtgagttccaggacagccagggct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cggatttctgagttcgaggccagcctggtctacagagtgagttccaggacagccagggct 381

                                                                       
Query: 181 acacagagaaaccctgtctcaaaaaaaaaaaaaaaaaattacaaattctcacattgtgtg 240
           |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 382 acacagagaaaccctgtctc-aaaaaaaaaaaaaaaaattataaattctcacattgtgtg 440

                                                                       
Query: 241 aatatagatctcagctctcccttctcatttcttcatttttgtccctattctcaataagaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatatagatctcagctctcccttctcatttcttcatttttgtccctattctcaataagaa 500

                                                                       
Query: 301 cagacttctgtgtgatcagcttcatttaaatacctctctaatgcttaccagcttttttaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagacttctgtgtgatcagcttcatttaaatacctctctaatgcttaccagcttttttaa 560

                                                                       
Query: 361 aaattggatattttatttatttacatttcaaatgttatgacctttcccagtttctctgca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaattggatattttatttatttacatttcaaatgttatgacctttcccagtttctctgca 620

                                                         
Query: 421 aattccctatctcgtccccgccccctccttaccctgcttctgggag 466
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aattccctatctcgtccccgccccctccttaccctgcttctgggag 666



 Score =  230 bits (119), Expect = 1e-64
 Identities = 141/151 (93%), Gaps = 6/151 (3%)
 Strand = Plus / Minus

                                                                       
Query: 74  gtggtggcgcatgcctttaatcccagcacttgggaagcagaggcaggcggatttctgagt 133
           ||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 184 gtggtggcgcacgcctttaatcccagcacttgggaggcagaggcaggcagatttctgagt 125

                                                                       
Query: 134 tcgaggccagcctggtctacagagtgagttccaggacagccagggctacacagagaaacc 193
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 124 tcgaggccagcctggtctacaaagtgagttccaggacagccagggctacacagagaaacc 65

                                          
Query: 194 ctgtctc-----aaaaaaaaaaa-aaaaaaa 218
           |||||||     ||||||||||| |||||||
Sbjct: 64  ctgtctcggggaaaaaaaaaaaacaaaaaaa 34


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space:   390336
Effective search space used:   390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)