Query= MSMg01no475_a23.b1 MSMg01no475_a23.b1 CHROMAT_FILE:
MSMg01no475_a23.b1 PHD_FILE: MSMg01no475_a23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:42 2005
(492 letters)
>mm_chr13_43679737_43680627
Length = 891
Score = 845 bits (437), Expect = 0.0
Identities = 476/489 (97%), Gaps = 1/489 (0%)
Strand = Plus / Minus
Query: 4 ggaattcaggtcattacgcaagaacaaaggatacacaaagccaaagactagaacaatgaa 63
||||||||||||| | |||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 691 ggaattcaggtcaggaagcaaaaacaaaggatacacaaagccaaagactagaacaacgaa 632
Query: 64 caagaaggaacaatggccagagaaaaaccatggtactccagagactccagatttctacaa 123
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 631 caagaaggaacaatggccagagaaaaaccatggtactccaaagactccagatttctacaa 572
Query: 124 agagctacgggagcctcaagcctaaggcacagagataaaacggcatctgtttcacagaac 183
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 571 agagctacgggagcctcaagcctaaggcacagagataaaacagcatctgtttcacagaac 512
Query: 184 atggctggctgcagaacggctttgctggcagatggagactgtaaagaagccatgtggctg 243
||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 511 atggctgactgcagaacggctttgctggcagatggagactgtaaggaagccatgtggctg 452
Query: 244 ttgtgtaagtcatctgaggaaggacagaggcctctcattaaggacacgactgtgaagatg 303
||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 451 ttgtgtaagtcatctgaggaaggacagcggcctctcag-aaggacacgactgtgaagatg 393
Query: 304 tgttcccatcagtcggccaatgtgaggtagaaatcaatgggctggcccaagatgacactg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tgttcccatcagtcggccaatgtgaggtagaaatcaatgggctggcccaagatgacactg 333
Query: 364 cagagagaaagttcatctgaacatccagaggtgacattctcagagagagagatccaccac 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 cagagagaaagttcatctgaacatccagaggtgacattctcagagagagagatccaccac 273
Query: 424 cctcttagctgtcagcactcccaaaccttgcctgtcatctgtgtcctgtggaacacattg 483
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 272 cctcttagctgtcagcactcccaaaccttgcctgtcatctgtgtcctgtggaacaccttg 213
Query: 484 aggacaggg 492
|||||||||
Sbjct: 212 aggacaggg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 891
Length adjustment: 10
Effective length of query: 482
Effective length of database: 881
Effective search space: 424642
Effective search space used: 424642
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_a23.g1 MSMg01no475_a23.g1 CHROMAT_FILE:
MSMg01no475_a23.g1 PHD_FILE: MSMg01no475_a23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:43 2005
(419 letters)
>mm_chr13_43514594_43515412
Length = 819
Score = 779 bits (403), Expect = 0.0
Identities = 415/419 (99%)
Strand = Plus / Plus
Query: 1 ttagtattagtgtcctgcccatgttctgtcatatgaaacaggacactgtacacatacaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttagtattagtgtcctgcccatgttctgtcatatgaaacaggacactgtacacatacaac 260
Query: 61 tggaaaaaggtacaagaatgcttttattaaaaaaactgtttaattcaaaattacataaag 120
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 tggaaaaaggtacaagaatgcttagattaaaaaaactgtttaattcaaaattacataaag 320
Query: 121 gagagtaaaaatttaaaagacgtcgtctcaccagaaaaatgtgcagtgctgcttttgcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagagtaaaaatttaaaagacgtcgtctcaccagaaaaatgtgcagtgctgcttttgcct 380
Query: 181 ggcgctaagctgtggatactcattccatgactggggctcatgcttggactactaaagggc 240
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtgctaagctgtggatactcattccatgactggggctcatgcttggactactaaagggt 440
Query: 241 cgaggactgacgggataactgtcttgagattttggacttcggcctcccaaacaccgcact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cgaggactgacgggataactgtcttgagattttggacttcggcctcccaaacaccgcact 500
Query: 301 tcactgtctgtaccattcaccatttctataaactgacgtactctgaaagaaaaaagtaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcactgtctgtaccattcaccatttctataaactgacgtactctgaaagaaaaaagtaag 560
Query: 361 tttacttaggcataatcattacgtcatatgaaaactgaaaatcagtatttacttggtat 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttacttaggcataatcattacgtcatatgaaaactgaaaatcagtatttacttggtat 619
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
