Query= MSMg01no477_f18.b1 MSMg01no477_f18.b1 CHROMAT_FILE:
MSMg01no477_f18.b1 PHD_FILE: MSMg01no477_f18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:47 2005
(708 letters)
>mm_chr13_11385073_11386181
Length = 1109
Score = 1317 bits (681), Expect = 0.0
Identities = 693/697 (99%), Gaps = 1/697 (0%)
Strand = Plus / Plus
Query: 13 gaattccaacactcataaggtgcagacaggaatagcagatattaatggtcatcctttcct 72
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 gaattccaacactcagaaggtgcagacaggaatagcagatattaatggtcatcctttcct 272
Query: 73 gctacatagcaagtgcgagcctaagcctggcctgcatgagatactgtcccaaaggggaga 132
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 273 gctacatagcaagtgcgagcctaagcctggcctacatgagatactgtcccaaaggggaga 332
Query: 133 gagaaagtcttgagaattttctagctgagtatggtggtctacagatgtaattccagcact 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gagaaagtcttgagaattttctagctgagtatggtggtctacagatgtaattccagcact 392
Query: 193 tgagaggcagaggcaggagaattacatgatcaaagccaatctgggctatgaagaaagacc 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tgagaggcagaggcaggagaattacatgatcaaagccaatctgggctatgaagaaagacc 452
Query: 253 ttgtctcaggcaaagaaatggataaacagataaagactttcaagagactaggagtttggg 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ttgtctcaggcaaagaaatggataaacagataaagactttcaagagactaggagtttggg 512
Query: 313 attcaaagtatgctaagataagttaaggcaatccaactgctctttttctactcttaaata 372
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 513 attcaaagtatgctaagataagttaaggcaatccaactgctctttttctacccttaaata 572
Query: 373 attgaacatatcaaaatctctgcttcttagaaacggaagataggaggtacaagaaatatc 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 attgaacatatcaaaatctctgcttcttagaaacggaagataggaggtacaagaaatatc 632
Query: 433 cagaattcctcatcttaacaatttatttactctctaaaccaaatcacatatatagtattt 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 cagaattcctcatcttaacaatttatttactctctaaaccaaatcacatatatagtattt 692
Query: 493 -tattactttcctgctgctgtgatgactaagaagaagggagggtttattccactcataaa 551
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 gtattactttcctgctgctgtgatgactaagaagaagggagggtttattccactcataaa 752
Query: 552 tccatcttgttgggaggggaagcagcaagcaacagacctagtaacaggaacaaaaaatag 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 tccatcttgttgggaggggaagcagcaagcaacagacctagtaacaggaacaaaaaatag 812
Query: 612 agagctcacacctcacctcccaaatcatggtgggcatcatagtttcatttttgttactgt 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 agagctcacacctcacctcccaaatcatggtgggcatcatagtttcatttttgttactgt 872
Query: 672 gataaaatattcagacacagcacagtttatggtagaa 708
|||||||||||||||||||||||||||||||||||||
Sbjct: 873 gataaaatattcagacacagcacagtttatggtagaa 909
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 708
Length of database: 1109
Length adjustment: 10
Effective length of query: 698
Effective length of database: 1099
Effective search space: 767102
Effective search space used: 767102
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no477_f18.g1 MSMg01no477_f18.g1 CHROMAT_FILE:
MSMg01no477_f18.g1 PHD_FILE: MSMg01no477_f18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:47 2005
(174 letters)
>mm_chr13_11565650_11566223
Length = 574
Score = 313 bits (162), Expect = 3e-90
Identities = 165/166 (99%)
Strand = Plus / Minus
Query: 1 tctttcacaaggattgtaaaaggctgaggctcgtgatctgaaaatactgttctagttaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tctttcacaaggattgtaaaaggctgaggctcgtgatctgaaaatactgttctagttaaa 264
Query: 61 cctgaaaggtcctttctaatcacaggagcattggaaaattgctggctacttagtgagaga 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 263 cctgaaaggtcctttctaatcacaggggcattggaaaattgctggctacttagtgagaga 204
Query: 121 gaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 166
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 158
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 174
Length of database: 574
Length adjustment: 8
Effective length of query: 166
Effective length of database: 566
Effective search space: 93956
Effective search space used: 93956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
