Query= MSMg01no478_b23.b1 MSMg01no478_b23.b1 CHROMAT_FILE:
MSMg01no478_b23.b1 PHD_FILE: MSMg01no478_b23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:46 2005
(642 letters)
>mm_chr13_21464298_21465338
Length = 1041
Score = 1073 bits (555), Expect = 0.0
Identities = 621/645 (96%), Gaps = 5/645 (0%)
Strand = Plus / Plus
Query: 1 gccagagtaaattatctattctctcat----taaatatctcaggaatcagatatgttgta 56
||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||
Sbjct: 197 gccagagtaaattatctattcactcattaagtaaatatctcaggaatcagatatgtcgta 256
Query: 57 ggtattccatggtagaaatggtgcacagccagccagctcttgacaacatgaaacagacac 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ggtattccatggtagaaatggtgcacagccagccagctcttgacaacatgaaacagacac 316
Query: 117 atttctgtttctaccactagtacagccagatgccctaacggtttgatgtaaaacaaggaa 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 atttctgtttctaccactagtacagccagatgccctaacggtttgatgtaaaacaaggaa 376
Query: 177 attctgaaagttggagggaagaaggcagatgagagactccaaaaaacatgagtgggttga 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 attctgaaagttggagggaagaaggcagatgagagactccaaaaaacatgagtgggttga 436
Query: 237 gagttttgtttttgctctcattcgtcctgtagtattggtgcagatcatagaagtgctaca 296
||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 437 gagttttgtttttgc-cacattcatcatgtagtattggtgcagatcatagaagtgctaca 495
Query: 297 taagctgggagctccagatcttacagctgagttaacccagttactatatttaaaaatgtt 356
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 taagctgggagttccagatcttacagctgagttaacccagttactatatttaaaaatgtt 555
Query: 357 ttatgcatataagcatttgtctacatgtatatctctgcagccacatgtgtgctgatgctg 416
|||||||||||||| |||| ||| || |||||||||| ||||| ||||||||||||||||
Sbjct: 556 ttatgcatataagcgtttgcctatatatatatctctgtagccaaatgtgtgctgatgctg 615
Query: 417 tagaaatcagaaacaagcatctgatctcctgaaactagaattataagttgtttacgaact 476
|||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||
Sbjct: 616 tagaaatcagaaacaagcatttgatctcctggaactagaattataagttgtttatgaact 675
Query: 477 gccctgtgagtgctggaaactaaatcctagtcctctgcaagccatctcttctgggtttgg 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gccctgtgagtgctggaaactaaatcctagtcctctgcaagccatctcttctgggtttgg 735
Query: 537 ctactgtatttttaatacgaatgatttttaaagtcggggtggggagtgcttacgtgcgtg 596
||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 736 ctactgtatttttaatatgaatgatttttaaagtgggggtggggagtgcttacgtgcgtg 795
Query: 597 tgtgcatgagtaaatgtacatgtatatttgggtacccatggagac 641
|| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 796 tgagcatgagtaaatgtatatgtatatttgggtacccatggagac 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1041
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1031
Effective search space: 651592
Effective search space used: 651592
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_b23.g1 MSMg01no478_b23.g1 CHROMAT_FILE:
MSMg01no478_b23.g1 PHD_FILE: MSMg01no478_b23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:46 2005
(288 letters)
>mm_chr13_21633937_21634624
Length = 688
Score = 538 bits (278), Expect = e-157
Identities = 284/286 (99%)
Strand = Plus / Minus
Query: 1 attaatcaaatagcaaatgcctacttctgaaaatatggaatcaaatattcagtagagaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 attaatcaaatagcaaatgcctacttctgaaaatatggaatcaaatattcagtagagaca 340
Query: 61 tgatgaaaaatagaatagaaaatctgtctgagactgagaactgtagcttaatgtttagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tgatgaaaaatagaatagaaaatctgtctgagactgagaactgtagcttaatgtttagca 280
Query: 121 tatgtgaggtcctgatttcagtccccagaaccacaaaaaaagaagaggaaagtggggggt 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tatgtgaggtcctgagttcagtccccagaaccacaaaaaaagaagaggaaagtggggggt 220
Query: 181 cagagaggggagaaaacaaaaggaaggaaagaaaggagaaaaaggagggagggaaggtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 cagagaggggagaaaacaaaaggaaggaaagaaaggagaaaaaggagggagggaaggtgg 160
Query: 241 gaggaaggaagaaaggaaggaaggaaggaaggaaggaaggaaggaa 286
||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 159 gaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaa 114
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
