Query= MSMg01no479_a14.b1 MSMg01no479_a14.b1 CHROMAT_FILE:
MSMg01no479_a14.b1 PHD_FILE: MSMg01no479_a14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:53 2005
(670 letters)
>mm_chr13_27094998_27096067
Length = 1070
Score = 1220 bits (631), Expect = 0.0
Identities = 660/675 (97%), Gaps = 10/675 (1%)
Strand = Plus / Minus
Query: 1 gttctgtgaatccttatagctactgatcaaatccaaagtaatcttgaagacctccaaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931 gttctgtgaatccttatagctactgatcaaatccaaagtaatcttgaagacctccaaaac 872
Query: 61 attagtagggagacatcagtgtggtttgacaacttttctctctattattttgtaaacttt 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 attagtagggagacgtcagtgtggtttgacaacttttctctctattattttgtaaacttt 812
Query: 121 tatttttatcattttcctccatggtttagtgttggtcaagttggattttgtgatagtttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 811 tatttttatcattttcctccatggtttagtgttggtcaagttggattttgttatagtttt 752
Query: 181 tctagtaaatgaacaatgttccatgatatcccaagcaaacaccaatatggagaattattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 tctagtaaatgaacaatgttccatgatatcccaagcaaacaccaatatggagaattattt 692
Query: 241 cacac-----tttttaacaataagcaagaaagaagttagagaagctcacacactgcaatg 295
||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 cacacacaaa-----aacaataagcaagaaagaagttagagaagctcacacactgcaatg 637
Query: 296 gagtccatcaaggaggcatagtctcaggaaacctggccaatgactgctaggccctctggc 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 gagtccatcaaggaggcatagtctcaggaaacctggccaatgactgctaggccctctggc 577
Query: 356 agctgcttgctgatgtgattaggtgggggaacagtttttccctcttctttgtcacccata 415
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 576 agctgcttgctgatgtgattaggtgggggaacagtttttctctcttctttgtcacccata 517
Query: 416 ctaatgaaagtggcacaggctacatcaatatgatgttcttaattaagtaagcatatggac 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ctaatgaaagtggcacaggctacatcaatatgatgttcttaattaagtaagcatatggac 457
Query: 476 agaaatgtagaccaagaagtggtttacttggcatgatttactaatttgtgtcaagcattt 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 agaaatgtagaccaagaagtggtttacttggcatgatttactaatttgtgtcaagcattt 397
Query: 536 ttcacaggataaatgagtgcaaaattgttccctcctacttgcatttcctaggcacttgac 595
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ttcacaggataaatgaatgcaaaattgttccctcctacttgcatttcctaggcacttgac 337
Query: 596 attgtggcatgtgatggatcatttatgttcaacttgggtaggctgtgggtgctcagtaat 655
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 attgtggtatgtgatggatcatttatgttcaacttgggtaggctgtgggtgctcagtaat 277
Query: 656 taaagaaatgttagt 670
|||||||||||||||
Sbjct: 276 taaagaaatgttagt 262
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space: 699600
Effective search space used: 699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no479_a14.g1 MSMg01no479_a14.g1 CHROMAT_FILE:
MSMg01no479_a14.g1 PHD_FILE: MSMg01no479_a14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:53 2005
(677 letters)
>mm_chr13_26908693_26909770
Length = 1078
Score = 1164 bits (602), Expect = 0.0
Identities = 659/682 (96%), Gaps = 9/682 (1%)
Strand = Plus / Plus
Query: 1 atataatgagtatgcgtgttagaactgacaagatatggacaactaatgaattcatggcct 60
|||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 atataatgagtatgtgtgttagaactgacaagatatagacaactaatgaattcatggcct 260
Query: 61 tacttagacttttatttgtaatcatggtggattgatatttcatctgaaagtgatccaaga 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacttagacttttatgtgtaatcatggtggattgatatttcatctgaaagtgatccaaga 320
Query: 121 gttgctcagagaatcagttagtgtctgataaattaaaaatgaaatctcagacagtgtgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 gttgctcagagaatcagttagtgtctgataaattaaaaatgaaatctcagacagtgtact 380
Query: 181 aagaaaaaaggtt-attccttgaatgtgtataactatctaatgataatctaagttgaaca 239
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagaaaaaaagtttattccttgaatgtgtataactatctaatgataatctaagttgaaca 440
Query: 240 tttttt----ataattcactaaatgataggtataatggattatgaaaaaattattatttt 295
|| ||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 441 tt----gaaaataattcactaaatgataggtataatggagtatgaaaaaaatattatttt 496
Query: 296 gttggggataattattcttcttctttgcaaaagcatatttaaaattcagccctgactgtt 355
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gttggggataatgattattcttctttgcaaaagcatatttaaaattcagccctgactgtt 556
Query: 356 cagacctactgtaacaggactttagaaaacaaagaaccaaccaaccaaatacaaaattaa 415
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 557 cagacctactgtaacaggactttagaaaacaaagaagcaaccaaccaaatacaaaattaa 616
Query: 416 aatactattaaaatcgaggtggctatggctccaacacctgccacaggattcagaagatgg 475
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 attactattaaaatcgaggtggctatggctccaacacctgccacaggattcagaagatgg 676
Query: 476 cttcggggctataaaaactctcagataatgactagggagttcagttaagttgtaccaacc 535
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 cttcggggctacaaaaactctcagataatgactagggagttcagttaagttgtaccaacc 736
Query: 536 ttatactgtttcccagatcctaggaagaagctttaaatggagttttccaagaacttatat 595
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ttatactgtttcccagatcttaggaagaagctttaaatggagttttccaagaacttatat 796
Query: 596 tttcaaggtggtggtttgaatggcatgtccctcatagtcttagatatttcaatatttggt 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 tttcaaggtggtggtttgaatggcatgtccctcatagtcttagatatttcaatatttggt 856
Query: 656 gcccagttggtgatgtactgga 677
|||||||||||||||||||||
Sbjct: 857 tcccagttggtgatgtactgga 878
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1078
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1068
Effective search space: 712356
Effective search space used: 712356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
