NNCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTGTAGGTTTCCCACTAAGAAACAAAACAAAAGTTGTGGTTGC
TAGGTGGATCCTTGACTGTGTGAGGTATAGAATGAGTGAATATTTCTATA
TAGCAGGAGGAATTATGAAGAGTCAGATGACATTTATAGAACCACCATGA
TTGTACCAAATAAAAGCAAGGAGAGTTGGACAAATGAGAGGTCATATCGT
CATGGAAACTAGTGTAGGGGAGGAAATATGAACATAAGACCAGCATAGTT
AAGCAATGGTATGTAACAGAATGCAACAGGGATTGGAAGATTAGAATAGT
CACTATAGGTAATAGAGTTAGGATTGTCATATGTGGCCTGAGATTGACCT
CATCAAACTCATGGATGTTTTAGCACAAAATAAAATTAGTGAATCCGTAT
CTAAATTCAGATTAAAAGTTGGTAGTGCATGTTGAGGGCATTTTCTACAA
TGCTTAGATCCCAAGATGCCTGTACATTTGACTCTTTAGGTAACAAGCTA
TTTACTACCTGTGTTGGATCAAATAGGTGGATGACATCCACCTTCAGAGC
TTGTCTGGTTCAAAGAAGTCAAAGTACCAAACTATAGTCAACTGTGCTTC
ACTGTTTCCTCTGTCTGTGACTAGAGTCGGCCCATGCTGCAATTCCAGAG
CTCTCAGGATGGTTTTTGGGCTTCCACTCACGAGTCTTGGATAAAGGTCA
GTTAATATCCTTAAGCTTATTTGATTTATTTTTCTGCGAA

TTTTCGATGCTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAGTGCAGAAAGTA
TTTTCAATAAAATGATAGAAAAAAATCTCCAACTTCAAGAACAAAATACC
TAACTAATAAAAGGACTGCTAGAGATATCATCATTTCTTGTTGGAAACTG
TACTACAGAGTTAAAATAATAATTAAAAAAACTGCATGATACCGACACAA
AACCAGACACATTGATTAATGGACTAGATTGGAAGACCCAAACATAAGCC
CACACACTTATGGCCACCATTTTTTTGATAAAGAAAGCAAAAATAAATAC
TGGAAAAAAGACATCTTCAACACATGGTGCTGGTCAAACTGGATAGCTGC
TCATAGAAGAATTAAGGTGTATCTATATTTATCACCCTGCACCAAACAAA
ACTACAAAGGATCAAAGACTTCTATAAAGGCTGGATATAGCAAATTTAAT
AGAAGAATAAGTGGGGAATAGTTTTGAACTTCTTGGCACAGGGGAAAACT
ATGAACAGAGCACCATTAGCACAAGCACTAAGATCAACAATTACTAATTG
GAACCTCATTAAGCTGCGAAGTTTCTGCATGAGAAAAACCATTATCATTC
AGATAAAGTGGTAGCTTACTGATTGGGGAGATTTTTATAAACTATCATTT
GATAGAGGATAATAGCCAAACTATGTAGAGCTCACGAACTGGACATTATG
AAACAAAGAGCCCATTTTAAAAACAAACAACCACCAACAA

Query= MSMg01no479_p24.b1 MSMg01no479_p24.b1 CHROMAT_FILE:
MSMg01no479_p24.b1 PHD_FILE: MSMg01no479_p24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:11 2005
         (573 letters)



>mm_chr13_8046670_8047643
          Length = 974

 Score =  984 bits (509), Expect = 0.0
 Identities = 551/565 (97%), Gaps = 1/565 (0%)
 Strand = Plus / Minus

                                                                       
Query: 10  ctgtaggtttcccactaagaaacaaaacaaaagttgtg-gttgctaggtggatccttgac 68
           |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 774 ctgtaggtttcccactaagaaacaaaacaaaagttgtgagttgctaggtggatccttgcc 715

                                                                       
Query: 69  tgtgtgaggtatagaatgagtgaatatttctatatagcaggaggaattatgaagagtcag 128
           ||||||||||||||||  |||||||||||||||  |||||||||||||||||| | ||| 
Sbjct: 714 tgtgtgaggtatagaacaagtgaatatttctatgcagcaggaggaattatgaacaatcaa 655

                                                                       
Query: 129 atgacatttatagaaccaccatgattgtaccaaataaaagcaaggagagttggacaaatg 188
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 atgacatttatagaaccaccatgattgtaccaaataaaagcaaggagagttggacaaatg 595

                                                                       
Query: 189 agaggtcatatcgtcatggaaactagtgtaggggaggaaatatgaacataagaccagcat 248
           |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| 
Sbjct: 594 agaggtcatatcatcatggagactagtgtaggggaggaaatatgaacataagaccagcac 535

                                                                       
Query: 249 agttaagcaatggtatgtaacagaatgcaacagggattggaagattagaatagtcactat 308
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 agttaagcaatggtatgtaacagaatgcaacagggattggaagattagaatagtcactat 475

                                                                       
Query: 309 aggtaatagagttaggattgtcatatgtggcctgagattgacctcatcaaactcatggat 368
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 474 aggtaatagagttaggattgtcatatgtggcctgagattgacctcaccaaactcatggat 415

                                                                       
Query: 369 gttttagcacaaaataaaattagtgaatccgtatctaaattcagattaaaagttggtagt 428
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 gttttagcacaaaataaaattagtgaatccgtatctaaattcagattaaaagttggtagt 355

                                                                       
Query: 429 gcatgttgagggcattttctacaatgcttagatcccaagatgcctgtacatttgactctt 488
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gcatgttgagggcattttctacaatgcttagatcccaagatgcctgtacatttgactctt 295

                                                                       
Query: 489 taggtaacaagctatttactacctgtgttggatcaaataggtggatgacatccaccttca 548
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 294 taggtaacaagctatttactacttgtgttggatcaaataggtggatgacatccaccttca 235

                                    
Query: 549 gagcttgtctggttcaaagaagtca 573
           |||||||||||||||||||||||||
Sbjct: 234 gagcttgtctggttcaaagaagtca 210


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 974
Length adjustment: 10
Effective length of query: 563
Effective length of database: 964
Effective search space:   542732
Effective search space used:   542732
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)