NNAACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG
CGCGGAATTCCAGGATTTACAGGAAAGCAGAGTGAGACCATGTATCAAAA
AATAAAATTAAAAAAAGTACCTCCATTCCCCAAGTACATTTCTTAGAAAT
ATCAATTTGCTTTGCTAGTCAGATAGTTCAGATCCTCAGACATTGATGTA
GCAAATATTGTATGGCCCTGATTGAAAGATGATTTTTAAAATGGTTGTTA
ATTGCTATTTTCACTTTCTAATTCTTTTTCCTTAGAAACCCACAATCTGC
CAAAGCAACCTCCACTTGCCCTTTTTTTGGGACAGGCCACACAGTGTCTA
GGCCTGATGGCTCGGTCAGGAGTTGGGTCCTGTGCATTTGCCACAGTGGA
AGACTACCTACATTAGCTATGCACTTCAAGAGCTCACACTCACATTGTGG
CAAACAGTCAACATGGAAGTAGACCGGCTCTGCTGATTTGAAATTTAGAT
TTTTTTTAATTATGTACTGGGGACAGGTTTTTGTCGCTTTACATTGCTTC
CTAGTTTACAGCATGATGCAAATGATTTTCTAACTTAGTGTTAGGAGAAA
ATATTTTCCATCTTTTAACCTCTTAGTTGTCTAAGAGTTAAATATTACTG
AATTTCAGACGTTCAAATTGATCATCAGAAATCCTTTAAACAATTACCTA
AAAGAAACAAAAATCCTGCCTTCT

TGGGCGATGCTAGGGGAGGGCTGGGGGGCGCCTGGTTTCAAAAGGGGGGG
TGACACNATAGAAGTTGCAACAAAAGGGAGGATGCTTAATCAAATCTTAA
GCAGAATGCACGTCAGGGATCCCCGTGGCATTTTACCAGCCCGGCAGCCC
CAGGAACCCAGCACCCTGTAATTCTCAATAGAAACAGCAGAGGGCAGCAA
CAGCAGTGAGTTCAGATAGGCGGCACATTGTCCTATAAAGGGGAAAACCA
AACTGCCAAGGCAGGCTGGGGATTTTGTCTCCACCAACCCAGTAGGCCAC
AGGTCCGTCCTCACCTTGTAGTTATTAGTTCCTAAACAAAGCATAAAAGG
ACCTCTGTTCACCAAGCAGAAAGGACACAGAATGTCCCCGAGAGGCTCAT
GTGTGTGGATGTCTACCCCACAGTTGGAGGTATGGTCTAGGGGAGGTTTC
AGACCTGGAAAGGTGGAGCCTTTTGTGCAGAGGGGATATTTGAAATTGGA
GGTAGGGTAGAGATGGGTGTTTGATCTTCAACTGGAAACTGTAAGATACG
GTTCGTGTTGATTTATTTGAAATACTTTTCCGAGGGATGCCTCAATTAGA
CATTTTTGTAAATTGGCGAAAATATAGAGGTATACTTAAACTAAGGCACG
AAAAATTTTTTATGTTTTATTGGGGGCTACCCTAACCCTGTTTCTCCCAT
AAAGCAGCCTTTAAACCCCTGATATGAACTATGGGTTTGGACCGGTAN

Query= MSMg01no480_e17.b1 MSMg01no480_e17.b1 CHROMAT_FILE:
MSMg01no480_e17.b1 PHD_FILE: MSMg01no480_e17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:33 2005
         (596 letters)



>mm_chr13_43498466_43499463
          Length = 998

 Score = 1081 bits (559), Expect = 0.0
 Identities = 588/603 (97%), Gaps = 12/603 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   gtgagaccatgtatcaaaaaataaaattaaaaaaagtacctccattccccaagtacattt 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 798 gtgagaccatgtatcaaaaaataaaattaaaaaaagtacctccattccccaagtaccttt 739

                                                                       
Query: 61  cttagaaatatcaatttgctttgctagtcagatagttcagatcctcagacattgatgtag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 738 cttagaaatatcaatttgctttgctagtcagatagttcagatcctcagacactgatgtag 679

                                                                       
Query: 121 c-aaatattgtatggccctgattgaaagatgatttttaaaatggttgttaattgctattt 179
           | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 caaaatattttatggccctgattgaaagatgatttttaaaatggttgttaattgctattt 619

                                                                       
Query: 180 tcactttctaattctttttccttagaaacccacaatctgccaaagcaacctccacttgcc 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tcactttctaattctttttccttagaaacccacaatctgccaaagcaacctccacttgcc 559

                                                                       
Query: 240 ctttttt-----tgggacaggccacacagtgtctaggcctgatggctcggtcaggagttg 294
           |     |     ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 c-----tagccatgggacaggccacacagtgtctaggcctgatggctcggtcaggagttg 504

                                                                       
Query: 295 ggtcctgtgcatttgccacagtggaagactacctacattagctatgcacttcaagagctc 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ggtcctgtgcatttgccacagtggaagactacctacattagctatgcacttcaagagctc 444

                                                                       
Query: 355 acactcacattgtggcaaacagtcaacatggaagtagaccggctctgctgatttgaaatt 414
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 acactcacattgtggcaaacagtcaacatggaagtagaccggctctgctgatttgaaatt 384

                                                                       
Query: 415 taga-ttttttttaattatgtactggggacaggtttttgtcgctttacattgcttcctag 473
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tagatttttttttaattatgtactggggacaggtttttgtcgctttacattgcttcctag 324

                                                                       
Query: 474 tttacagcatgatgcaaatgattttctaacttagtgttaggagaaaatattttccatctt 533
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tttacagcatgatgcaaatgattttctaacttagtgttaggagaaaatattttccatctt 264

                                                                       
Query: 534 ttaacctcttagttgtctaagagttaaatattactgaatttcagacgttcaaattgatca 593
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ttaacctcttagttgtctaagagttaaatattactgaatttcagacgttcaaattgatca 204

              
Query: 594 tca 596
           |||
Sbjct: 203 tca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 998
Length adjustment: 10
Effective length of query: 586
Effective length of database: 988
Effective search space:   578968
Effective search space used:   578968
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)