Query= MSMg01no481_d22.b1 MSMg01no481_d22.b1 CHROMAT_FILE:
MSMg01no481_d22.b1 PHD_FILE: MSMg01no481_d22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:49 2005
(622 letters)
>mm_chr13_58674651_58675672
Length = 1022
Score = 1108 bits (573), Expect = 0.0
Identities = 604/617 (97%), Gaps = 5/617 (0%)
Strand = Plus / Minus
Query: 4 ggaattcaaaaccagccttggctacaacctgaggctcacgagaccttggctcaaaataat 63
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 908 ggaattcaaaaccagccttggctacaacctgaggctcatgagaccttggctcaaaataat 849
Query: 64 aataataataataataataataataacaataattcttgtttttcttttctttgtactttt 123
|||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 848 aataat-----taataataacaataacaataattcttgcttttcttttctttgtactttt 794
Query: 124 aacatttggatgtagccctcaggacattttaaatgtgggtagtttatctgtaatattgta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 aacatttggatgtagccctcaggacattttaaatgtgggtagtttatctgtaatattgta 734
Query: 184 ccctaattttaattccatggcacaaattaggcttgccgctttgctgcgcctgtcaaacat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 ccctaattttaattccatggcacaaattaggcttgccgctttgctgcgcctgtcaaacat 674
Query: 244 gttcatctctgtagtcaattaagctcgccactgcccactagctgtgtcgtccattggacc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 gttcatctctgtagtcaattaagctcgccactgcccactagctgtgtcgtccattggacc 614
Query: 304 acatctttatccttcctaccccattatcctgcccaagcggtgccacacttctgagatggc 363
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 613 acatctttatccttcctaccccattatcctgcccaagcggtgctgcacttctgagatggc 554
Query: 364 tcccccaaacagagaaagagcctctctctgcatgtagtggtgactaggttcatccttgta 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tcccccaaacagagaaagagcctctctctgcatgtagtggtgactaggttcatccttgta 494
Query: 424 tagcgcctatggcttattggagccaacaaccacagccagtacaggtcagacggaatgtca 483
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 493 tagcgcctatggcttattggagccaacaaccccagccagtacaggtcagacggaatgtca 434
Query: 484 gaaatggcaggaagtctgcctgtagggatgacttaaaccaagattctcagcattcctaac 543
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 433 gaaatggcaggaagtctgcctgtagggatgacttaaaccaagattctcagtattcctaac 374
Query: 544 tccccaagtctgcttactgaatttactagagcttccccaatctctcagggtggctcaggt 603
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ttcccaagtctgcttactgaatttactagagcttccccaatctctcagggtggctcaggt 314
Query: 604 tccttcctgtggctcat 620
|||||||||||||||||
Sbjct: 313 tccttcctgtggctcat 297
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no481_d22.g1 MSMg01no481_d22.g1 CHROMAT_FILE:
MSMg01no481_d22.g1 PHD_FILE: MSMg01no481_d22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:49 2005
(601 letters)
>mm_chr13_58498341_58499341
Length = 1001
Score = 1154 bits (597), Expect = 0.0
Identities = 600/601 (99%)
Strand = Plus / Plus
Query: 1 tcatgttccccgccaccaagttaaggacaccctcgctgttatggtaatactggcacacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcatgttccccgccaccaagttaaggacaccctcgctgttatggtaatactggcacacct 260
Query: 61 tctcttgggtaatttgggggaatatgcaagtggtgaacactgtatctggagtaaggttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctcttgggtaatttgggggaatatgcaagtggtgaacactgtatctggagtaaggttat 320
Query: 121 gaataccagttagaaattagactacttaatgggctctgcaagaaaacaaatacaaatgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaataccagttagaaattagactacttaatgggctctgcaagaaaacaaatacaaatgca 380
Query: 181 agacaaaacaaagacagtacaaatgagaagtgaaagaaagtgaaccagttagcatttcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 agacaaaacaaagacagtacaaatgagaagtgaaagaaagtgaaccagttagcgtttcat 440
Query: 241 cagaaaaaattatgaacagacaatgttgggaagcaaggtgggccacaaagacagagcgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagaaaaaattatgaacagacaatgttgggaagcaaggtgggccacaaagacagagcgag 500
Query: 301 agactatttgggtaacagtttgatttacaatgcagcaaatatgcaacacttgaagctgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agactatttgggtaacagtttgatttacaatgcagcaaatatgcaacacttgaagctgtg 560
Query: 361 ctccttccatcgaaataaaattagtggatcgtttgggtgggcaactcacggtaaaagttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctccttccatcgaaataaaattagtggatcgtttgggtgggcaactcacggtaaaagttc 620
Query: 421 agtgacaaaaggacttaatggggaaaataagacagaaacttgaaaaacaatacaccgtct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agtgacaaaaggacttaatggggaaaataagacagaaacttgaaaaacaatacaccgtct 680
Query: 481 aaggggatactatttaattatataaaaggcaggtaataaaatacatttctctctttctaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaggggatactatttaattatataaaaggcaggtaataaaatacatttctctctttctaa 740
Query: 541 tcaggcagtgaggcataaactgttgggacataccgctcggggccactgctgtctgggact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcaggcagtgaggcataaactgttgggacataccgctcggggccactgctgtctgggact 800
Query: 601 g 601
|
Sbjct: 801 g 801
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1001
Length adjustment: 10
Effective length of query: 591
Effective length of database: 991
Effective search space: 585681
Effective search space used: 585681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
