ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCACAGCGCATGAAAAGAGTTATTTATCACCGTGATCAAGTGTTGTATT
CCCACAGGGCAAGGATGGCTCAAGTACACAAATCGATAAATATGGATGTG
CTACATCAATCAAGTGGAGGATAAAATCCCACCCAATCGTATTAATAGAT
GTAGAAAAGCCACTTGGCAAAATTTAACAACTGTTTAGGATTATACATTT
TGAATGTGGGCTGGAGAGATGGCTCTGTGGTTGAGAACAGTTGCTGCTCT
TACAATAGACCCAAGTTTGGTTCCAAGAATCCATATGAATCCATATGGCA
GCTTACAAATTCTGTAACTCCAGTTCCAGGGGATCCGGTGAACTCTTCTG
GACTCTTCAGACTCTAAGCATACATGTGACATAACACATACGTGGAAGCA
AACATTTACACAAATAAAATAAAAATAAATTAAAATTGAATGTATGCGGT
ATAAAGTAATATATCCTAACACAATTATATGTAAGTCCACATATAATTAG
CTAACAGCTAGTGCTATACCCAGTAGTAAAAAGAAGAAAACTTTGCATAC
AATGATACCCCCAACTTGCCAATTCTGTTCTATATTATATTGGGGTCCTA
GTCAGAAAACAAATAAAATATGCTCACATTACAAAGAAATAAGTGAACTC
ATCTCTTTTTGTGCATGCAATGCTCTGTAAGGCTTGTATAGTTGACAGCT
GN

TTACTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXAATCGCCAAACTATCCATCCTGAACCATCC
ATAAAGAGTGGCTTTTATGTTGTTCTTGGGTTTTATCTGTTTGTTTTTGT
TTGTTTGTTTGTTTGTTTGTTTTACCACAAGTATCTCAGCATTCAGGTCT
TGGGCAGTGGAAGGCAGTACAACCATTATACTGTTCCATGTAATGTCAAA
TGATTTCACATGAGACCAAATAGAGGCCATCTCTGTCATTTGAGGTGACA
CACCCAAGTTCTAAGTGCTCTTCTGAACAAATGGGCCATCTTCCCTCTCA
ACCCCTGCCCCTTTCTAGCTAGTCAATTTTGGTAGCAAGCTTGTCTTTGG
TTAAATAAATAAATCATTTATTAATTAAAAGTTATTCTGATTATTCTAGA
TTTCTGAGACAGGAAAGGGTAGGAGAACTCATACAAAAAAATAAGAAGAC
AGTGAAAATTGGGTGGAGACGGATCATGAAATGAAGCAGGGGTCAAGATT
CTACAGCAGACTCCCACACACACTTACCCACGAGGGACTCATCCTGTGAC
CCCAGGGATGCTGAACTATAAGCGGCACTGAATCCAATGTATCCTATATA
CTTCCTGACTACACGTAAGTGTGATGAAGTTTAACTTATAAGCAGGCACA
CTAAGCAGCAACAAGAATAACAACGGTAAATAGAACATCTATAACCACAG
GAT

Query= MSMg01no481_e23.g1 MSMg01no481_e23.g1 CHROMAT_FILE:
MSMg01no481_e23.g1 PHD_FILE: MSMg01no481_e23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:55 2005
         (665 letters)



>mm_chr13_34897165_34898229
          Length = 1065

 Score = 1236 bits (639), Expect = 0.0
 Identities = 657/665 (98%), Gaps = 4/665 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatcgccaaactatccatcctgaaccatccataaagagtggcttttatgttgttcttggg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 aatcgccaaactatccatcctgaaccatccataaagagtggcttttatgttgttcttggg 264

                                                                       
Query: 61  ttttatctgtttgtttttgtttgtttgtttgtttgtttgttttaccacaagtatctcagc 120
           |||||||||||||||    |||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttttatctgtttgtt----tttgtttgtttgtttgtttgttttaccacaagtatctcagc 320

                                                                       
Query: 121 attcaggtcttgggcagtggaaggcagtacaaccattatactgttccatgtaatgtcaaa 180
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attcaggtcttggacagtggaaggcagtacaaccattatactgttccatgtaatgtcaaa 380

                                                                       
Query: 181 tgatttcacatgagaccaaatagaggccatctctgtcatttgaggtgacacacccaagtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgatttcacatgagaccaaatagaggccatctctgtcatttgaggtgacacacccaagtt 440

                                                                       
Query: 241 ctaagtgctcttctgaacaaatgggccatcttccctctcaacccctgcccctttctagct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctaagtgctcttctgaacaaatgggccatcttccctctcaacccctgcccctttctagct 500

                                                                       
Query: 301 agtcaattttggtagcaagcttgtctttggttaaataaataaatcatttattaattaaaa 360
           |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 agtcaattttggtagcgagcttgtctttggttaaataaataaattatttattaattaaaa 560

                                                                       
Query: 361 gttattctgattattctagatttctgagacaggaaagggtaggagaactcatacaaaaaa 420
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 561 gttattctgattattctagatttctgagacatgaaagggtaggagaactcatacaaaaaa 620

                                                                       
Query: 421 ataagaagacagtgaaaattgggtggagacggatcatgaaatgaagcaggggtcaagatt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ataagaagacagtgaaaattgggtggagacggatcatgaaatgaagcaggggtcaagatt 680

                                                                       
Query: 481 ctacagcagactcccacacacacttacccacgagggactcatcctgtgaccccagggatg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctacagcagactcccacacacacttacccacgagggactcatcctgtgaccccagggatg 740

                                                                       
Query: 541 ctgaactataagcggcactgaatccaatgtatcctatatacttcctgactacacgtaagt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctgaactataagcggcactgaatccaatgtatcctatatacttcctgactacacgtaagt 800

                                                                       
Query: 601 gtgatgaagtttaacttataagcaggcacactaagcagcaacaagaataacaacggtaaa 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gtgatgaagtttaacttataagcaggcacactaagcagcaacaagaataacaacggtaaa 860

                
Query: 661 tagaa 665
           |||||
Sbjct: 861 tagaa 865


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space:   691025
Effective search space used:   691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)