NCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCCTGGATTTGAAGCCAGTGTGGTGTACACAGTGCAACCTTTTTTT
TTTAACCATTTTTTATTAGATATTTTCTTCATTTACATTTCAAATGCTAT
CCCAAAAGTCCCCTATACCCTCCCCCCGCCCTGCTCCCCTACCCACTCAC
TCCCACTTCTTGGCCTTGGCATTCCCCTGTACTGGGGCATATAAAGTTTG
CTAAACCAAGGGGCCTCTCTTCCCAATGATGGCCGACTAGGCCATCCTCT
GCTACATATGCAGCTAGAGACAGGAGCTCTGGGGTTACTGGTTAGTTCAT
ATTGTCGTTCCTCCTATAGGGTTGCAGACCCCTTCAGCTCTTGGGTACTT
TCTCTAGCTCCTCTATTGGGGGCCCTATGTTCCATCCAATAGATGACTGT
GAGCATCCACTTCTGTATTTGCCAGGCACTGGCTAAGCCTCACAGGAGAC
AGCTATATCAGGGTCCTTTCAGCAAAAGCTTGTTGGCGTATGCAAGTGTC
TGCATTTGGTGGCTGATTATGGATGGGATGGACTCCCGGGTGGGGCAGTC
TCTGGATGGTCCATCCTTTTGCCTTAGCTCCAAACTTTGAGACCTTATTT
CTAAAAAAAGGCCCATAGCACATGATAATCAGGCTAGAATTGTATCTTGT
TTGTCCTGTANGAGTTCACATGACTGTTCGGCATCACCTGACAGCAACAT
ACTATTCATTACTTAAATTATCTTTGGCT

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAATGAGAGACTGTCTCAAAACA
CAAGGCAGAAAATGATTGTGGAAGACACCTAGCATCAACCTCCGGCCAGC
ATCTGTACATACATATGGAACAGACAGACAGACAGACAGACAGACAGACA
GAGGCATGAATGCATGCATGCACAGACACATGTACCCATAGACACACCAC
TACTCTCGAACACACACACACACACCACTTGATTTCACATCTGCATGAAC
CTCTTATTTCATATCACTAAAGGGTACTTTACTTGTGGACATACCATGTT
GCCTCTTCTAAAATTCTGTAGACTTTACAGGAAAGGTGGAAAGATATTTT
ATTCGAATGTGTGTAATGTACAGTGCTGGCCAAGGAATAAATGTCCACAC
ATCCTTTCAACCAGTAAATCAAAAAGAGATCACAGTTGACAACCACTTTG
CCACCTTTTCTGGCATGAAGGCCTGATTTTTCCCCACTTCAAATTTAAGT
CTGAAGTGGAAAAAAGGCATATTTGCTTGTAAACACACACACACAGCAAG
GCCAACCTTTCAACGTTCTGTTGATTAATCACATCTATTTGTGGTCTTGC
CCTTCACTAAGCTGTGCTTGATCTCCTCAAGAGATTTTCTTTTATGAGAT
TTGATTCGCACAAATGGGAAGAAGGGTTTTCATTAATGTTTCTTGTCCCC
CCCCCCTTTTTTTTCTTAAACTTTGGGAAG

Query= MSMg01no483_a22.g1 MSMg01no483_a22.g1 CHROMAT_FILE:
MSMg01no483_a22.g1 PHD_FILE: MSMg01no483_a22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:07 2005
         (538 letters)



>mm_chr13_109033211_109034148
          Length = 938

 Score =  845 bits (437), Expect = 0.0
 Identities = 501/545 (91%), Gaps = 36/545 (6%)
 Strand = Plus / Minus

                                                                       
Query: 24  aaggcagaaaatgattgtggaagacacctagcatcaacctccggccagcatctgtacata 83
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 938 aaggcagaaaatgattgtggaagacacctagcatcaaccttcggccagcatctgtacata 879

                                                                       
Query: 84  catatggaacagacagacagacagacagacagacagacagaggcatgaatgcatgcatgc 143
           ||||||||    ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 878 catatgga----acagacagacagacagacagacagatagaggcatgaatgcatgcatgc 823

                                                                       
Query: 144 acagacacatgtacccatagacacaccactactctcgaac-------------------- 183
           |||||||||||||||||||||||||||||| |||||||||                    
Sbjct: 822 acagacacatgtacccatagacacaccactgctctcgaacacacacacacacacacacac 763

                                                                       
Query: 184 ------------acacacacacacaccacttgatttcacatctgcatgaacctcttattt 231
                       |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 762 acacacacacatacacacacacacaccacttggtttcacatctgcatgaacctcttattt 703

                                                                       
Query: 232 catatcactaaagggtactttacttgtggacataccatgttgcctcttctaaaattctgt 291
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 catatcactaaagggtactttacttgtggacataccatgttgcctcttctaaaattctgt 643

                                                                       
Query: 292 agactttacaggaaaggtggaaagatattttattcgaatgtgtgtaatgtacagtgctgg 351
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 642 agactttacaggaaaggtggaaagatattttattcgaatgtgtgtagtgtacagtgctgg 583

                                                                       
Query: 352 ccaaggaataaatgtccacacatcctttcaaccagtaaatcaaaaagagatcacagttga 411
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 ccaaggaataaatgtccacacatcctttcaaccagtaaatcaaaaagagatcacagttga 523

                                                                       
Query: 412 caaccactttgccaccttttctggcatgaaggcctgatttttccccacttcaaatttaag 471
           ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 522 caaccactttgccacctttactggcacgaaggcctgatttttccccacttcaaatttaag 463

                                                                       
Query: 472 tctgaagtggaaaaaaggcatatttgcttgtaaacacacacacacagcaaggccaacctt 531
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 462 tctgaagtggaaaaaaggcatatttgcttgtaaacacacacacacagcaaggccaacttt 403

                
Query: 532 tcaac 536
           |||||
Sbjct: 402 tcaac 398


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 50
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space:   489984
Effective search space used:   489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)