CAGACACCCCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAG
ACCGCGGAATTCTTCCGTNACGTTATTGACCATGTAATTAATGAATCCAC
CTTTGAGACAAAAAAAAGTGCGTGTCTCGCTGTGTGTCTCGCGCCGACAG
AGACACACACAGAGAGAGAGAGACCCCCCCCCCCCCCCCCACCCNCCCCC
CCCCCCCCCCACCCCAACCCCCCCCCCCCCCCCCCCACGCACCCCCCACC
CCCCCCCCCCCCCCCCCCCCCCCCCCTCCCCCCCCCCCCCCCCCCCTCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTGCCCCCCCCCTTCCCCCC
CCCGCCCCCTCCTCCCCTCCCCCCCCCCCCCCCCCCCGCCCCCCCCCCCC
CCCCCCCCCCCCCTCCCCCCCCCACCCCCCCCCCCCCCCCCCTCCCCCCC
CCCCCCCCCCAATAAACCCCCCCCACCCCCCCCCCCCGCACCCCCCACCC
CCCCCCCCCCCCCCCCTACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCATCACTACCCTCCCCCCCCCCCCCCCCTCGCCCCCCCCCACACCCA
CCCCCCCCTCCCTCCCCCCACCCCCTTTCTCCCCCCCCCCCCCCCTACCC
CCCCCCCCGCATTTACCCCCCCCCCCTCTAATCCCCCCCCCCCCCCCCCC
CCCCCCCCCCTCCCCCCCCACCTCCCCCACCCCCCCCCCCCCCCCCCCCC
CCACCTCCC

CTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXACTCAGCTCCAAGGATCATAAGTA
CCCATTGTCATTCACATTTTTCTAACAGCCTCTAAGATTTAGGGCTTTAT
CAATAATGACTTTTATATAGTCATAATTTGATGAGTTTTTTTATATTCAG
CAATCAATGCTACTCAAAGCTTTCAGCCAGTGATTCCACTAAGCATTAAT
TCATCAAATTATCAAAATACTTAACACAGTCTTAACCTAGTCATATTTAT
GAAAGTAAAAATTTCTCTATTAAGTCATGTGAATTAGGAGTGGGGAGTGC
CCTCAATCCTTTTGGTATCCTGAACGGCCAAGACCTCCCCCCCCCCCATA
CTGAGGACTTGTAAAACGGGAGAAACACCTTTGGGGAACTGTAAGGGTTT
TTGAGAGAGCATAGTAGCTCAGAAAACTCATCAGTATGTATTAAAACTGC
ACAGGGAAAACTGTCAGGCTTCTAGAGGCAAGTAACACATCAAAGAGACA
AACTACCCGCTGCCGGGGCTCAGGCCGACATGAATATATATCCAACTGTG
GGAAATATGGCCAGACCCAACAGTGGAAAGGATGCTCAGCACCCACACAG
AGCATGACTGATTATAGGCAACCCCTTCCCCTGCAATGCTAAGAAGGCTG
GTCCCTGGACCACAGCCTACGTGA

Query= MSMg01no484_l01.g1 MSMg01no484_l01.g1 CHROMAT_FILE:
MSMg01no484_l01.g1 PHD_FILE: MSMg01no484_l01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:21 2005
         (613 letters)



>mm_chr13_25685936_25686953
          Length = 1018

 Score = 1133 bits (586), Expect = 0.0
 Identities = 609/618 (98%), Gaps = 5/618 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   actcagctccaaggatcataagtacccattgtcattcacatttttctaacagcctctaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actcagctccaaggatcataagtacccattgtcattcacatttttctaacagcctctaag 260

                                                                       
Query: 61  atttagggctttatcaataatgacttttatatagtcataatttgatgagttttttt--at 118
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||
Sbjct: 261 atttagggctttatcaataatgacttttatatagtcataatttgatgagtttttttttat 320

                                                                       
Query: 119 attcagcaatcaatgctactcaaagctttcagccagtgattccactaagcattaattcat 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attcagcaatcaatgctactcaaagctttcagccagtgattccactaagcattaattcat 380

                                                                       
Query: 179 caaattatcaaaat-acttaacacagtcttaacctagtcatatttatgaaagtaaaaatt 237
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaattatcaaaatgacttaacacagtcttaacctagtcatatttatgaaagtaaaaatt 440

                                                                       
Query: 238 tctctattaagtcatgtgaattaggagtggggagtgccctcaatccttttggtatcctga 297
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 441 tctctattaagtcatgtgaattaggaggggggagtgccctcaatccttttggtatcctga 500

                                                                       
Query: 298 acggccaagacctccccccccccc--atactgaggacttgtaaaacgggagaaacacctt 355
           ||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||
Sbjct: 501 acggccaagacctcccccccccccccatactgaggacttgtaaaacggaagaaacacctt 560

                                                                       
Query: 356 tggggaactgtaagggtttttgagagagcatagtagctcagaaaactcatcagtatgtat 415
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 561 tggggaactgtaagggtttttgagtgagcatagtagctcagaaaactcatcagtatgtat 620

                                                                       
Query: 416 taaaactgcacagggaaaactgtcaggcttctagaggcaagtaacacatcaaagagacaa 475
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taaaactgcacagggaaaactgtcaggcttctagaggcaagtaacacatcaaagagacaa 680

                                                                       
Query: 476 actacccgctgccggggctcaggccgacatgaatatatatccaactgtgggaaatatggc 535
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 681 actacccgctgccggggctcaggctgacatgaatatatatccaactgtgggaaatatggc 740

                                                                       
Query: 536 cagacccaacagtggaaaggatgctcagcacccacacagagcatgactgattataggcaa 595
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cagacccaacagtggaaaggatgctcagcacccacacagagcatgactgattataggcaa 800

                             
Query: 596 ccccttcccctgcaatgc 613
           ||||||||||||||||||
Sbjct: 801 ccccttcccctgcaatgc 818


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1018
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1008
Effective search space:   607824
Effective search space used:   607824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)