Query= MSMg01no486_b24.b1 MSMg01no486_b24.b1 CHROMAT_FILE:
MSMg01no486_b24.b1 PHD_FILE: MSMg01no486_b24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:20 2005
(559 letters)
>mm_chr13_39364143_39365101
Length = 959
Score = 1058 bits (547), Expect = 0.0
Identities = 556/559 (99%)
Strand = Plus / Plus
Query: 1 actgttatttatcattacaaacctctttatcatttagtcaataaaaggcctctctcacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgttatttatcattacaaacctctttatcatttagtcaataaaaggcctctctcacac 260
Query: 61 acactttttttcctgtggcgtgctcagagtcagaaatcggtattagtctctcctggcctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acactttttttcctgtggcgtgctcagagtcagaaatcggtattagtctctcctggcctg 320
Query: 121 aaggcaggagatgtcaaaagctaaatcatgatctaccctggcttcctggctaaattgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaggcaggagatgtcaaaagctaaatcatgatctaccctggcttcctggctaaattgtgt 380
Query: 181 atgaaggccccaggcaaaatggctcacatgctcattatttgaaaccgatattttttttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgaaggccccaggcaaaatggctcacatgctcattatttgaaaccgatattttttttca 440
Query: 241 tcccactttgagtttttctttctttttctcctctttctttttacatattgagacatataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcccactttgagtttttctttctttttctcctctttctttttacatattgagacatataa 500
Query: 301 taagggcatgacttggaagccgtcagacatgacacaaggcaacaagaaccccacataacc 360
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taagggcataacttggaagccgtcagacatgacacaaggcaacaagaaccccacataacc 560
Query: 361 gttcatagatcttctgatcaagggctagcagaaaaggtgagaggcatgataaggaggaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gttcatagatcttctgatcaagggctagcagaaaaggtgagaggcatgataaggaggaaa 620
Query: 421 aaatggtggttgtacctcttggaaattttgattcccgatagaattttttaaagcatatta 480
||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 621 aaatggtggttgtacctcttggaaattttgattcctgatagaatttttttaagcatatta 680
Query: 481 gtgatcgggtataccagtaatcagactctaagacagacaggttgtaggctggccatgagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtgatcgggtataccagtaatcagactctaagacagacaggttgtaggctggccatgagt 740
Query: 541 tgtccaattttttgttatt 559
|||||||||||||||||||
Sbjct: 741 tgtccaattttttgttatt 759
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 959
Length adjustment: 10
Effective length of query: 549
Effective length of database: 949
Effective search space: 521001
Effective search space used: 521001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no486_b24.g1 MSMg01no486_b24.g1 CHROMAT_FILE:
MSMg01no486_b24.g1 PHD_FILE: MSMg01no486_b24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:20 2005
(636 letters)
>mm_chr13_39522665_39523698
Length = 1034
Score = 1110 bits (574), Expect = 0.0
Identities = 620/636 (97%), Gaps = 6/636 (0%)
Strand = Plus / Minus
Query: 1 acttctccccatggagtctcttacattgggtgactatagtttctgttgatgatctaacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 acttctccccatggagtctcttacattgggtgactatagtttctgttgatgatctaacac 773
Query: 61 aacctgacacccaatactaattctagataaatccaattaagcccggaagcaaaacagctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 aacctgacacccaatactaattctagataaatccaattaagcccggaagcaaaacagctg 713
Query: 121 gattaaccatcctgcataaattgtctttttcagttgtttactttgcacttttgcaaatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 gattaaccatcctgcataaattgtctttttcagttgtttactttgcacttttgcaaatga 653
Query: 181 actctttaacatggagatgttgagctacttacatttatatatgatattattttgagaagc 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 actttttaacatggagatgttgagctacttacatttatatatgatattattttgagaagc 593
Query: 241 ctggcataaaacctttagaagtaaggactggagacttctgttgctgctaccaatgtgagt 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 592 ctggcataaaacctttagaagtaaggactggaggcttctgttgctgctaccaatgtgagt 533
Query: 301 gttacaattaaggttgcaggtgaacac-ttctgctgtgcatagactctctgcgtgcgaat 359
||||||||||||||||||||||||| | | | || ||||||||||||||| ||||||||
Sbjct: 532 gttacaattaaggttgcaggtgaacgcgtgc--ct-tgcatagactctctgtgtgcgaat 476
Query: 360 ggttattagaagcatggctatctcagcattctgaaacaaggtttccacaggaagtctagg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ggttattagaagcatggctatctcagcattctgaaacaaggtttccacaggaagtctagg 416
Query: 420 aggctgggttatgtgtgccagttttgagccatttaattcacttctctgtgaagataaaac 479
||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 415 aggctggcttatttgtgccagttttgagtcatttaatttacttctctgtgaagataaaac 356
Query: 480 caaaacca-atcaaataaaaataaactgcccagcaaaactctcaacaaaatgtgtttttg 538
||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 caaaa-cagattaaataaaaataaactgcccagcaaaactctcaacaaaatgtgtttttg 297
Query: 539 ttgttactaaataaaaatgtaaaatagataagagatctcaattaataaggatgtttatgt 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 ttgttactaaataaaaatgtaaaatagataagagatctcaattaataaggatgtttatgt 237
Query: 599 ctctttaatcaggaaatatcatttagaactgggggt 634
||||||||||||||||||||||||||||||||||||
Sbjct: 236 ctctttaatcaggaaatatcatttagaactgggggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1034
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1024
Effective search space: 641024
Effective search space used: 641024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
