Query= MSMg01no487_e15.b1 MSMg01no487_e15.b1 CHROMAT_FILE:
MSMg01no487_e15.b1 PHD_FILE: MSMg01no487_e15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:09:51 2005
(661 letters)
>mm_chr13_103475177_103476238
Length = 1062
Score = 1147 bits (593), Expect = 0.0
Identities = 644/661 (97%), Gaps = 5/661 (0%)
Strand = Plus / Minus
Query: 4 gaattcctattcccttcctttacttctgccttcctgaaatacttctttatgttctttgtg 63
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 gaattcctattcccctcctttacttctgccttcctgaaatacttctttatgttctttgtg 803
Query: 64 ctgtcacagtgttagcctctaacagtgaacttcggaagcaaagaggtaggcaacaactgc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 ctgtcacagtgttagcctctaacagtgaacttcggaagcaaagaggtaggcaacaactgc 743
Query: 124 ctaaacagcgacctgccatccttccttcattcaaattccttctcttccagaaacagccca 183
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 742 ctaaacagtgacctgccatccttgcttcattcaaattccttctcttccagaaacagccca 683
Query: 184 tccacatgacgcaaagcatgttgggggtggttgagctgatgaacaaaattgccgggctaa 243
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tccacatgacgcaaagcatgatgggggtggttgagctgatgaacaaaattgccgggctaa 623
Query: 244 ccattc-tttttctcgttt-tggcaggattatcagcagagttcaacagcctgttaggttt 301
|||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ccattcttttttctc-tttatggcaggattatcagcagagttcaacagcctgttaggttt 564
Query: 302 caatctccagacacaggccctcccgtgaccttagcacacaccattagcttctaagtgtcc 361
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 563 caatctccagacacaggcccttctgtgaccttagcacacaccattagcttctaagtgtcc 504
Query: 362 ccatttcttctgtgaaagagagacccgtccctcccgtgctcacctctaagaatgcctatg 421
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 503 ccatttcttctgtgaaagagagacccgtccctcccatgctcacctctaagaatgcctatg 444
Query: 422 atgtgagaccgccccatgaaaactttgatgtttttataccgttgt-tcataaagcctatg 480
| ||||||||||||||||||| |||||| |||||||||| ||| | ||||||||||||||
Sbjct: 443 acgtgagaccgccccatgaaagctttgacgtttttatactgtt-tctcataaagcctatg 385
Query: 481 gatgatgaggctggattcctgtcctctctctggatggttagtgcttgaagcagcagtacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gatgatgaggctggattcctgtcctctctctggatggttagtgcttgaagcagcagtacc 325
Query: 541 ttcaaagtaactaggggcaaccacatggaggaaacagggcctacattcagaactttctag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttcaaagtaactaggggcaaccacatggaggaaacagggcctacattcagaactttctag 265
Query: 601 ttttcaattcccttacagtgactcttcctcttactttttgccagccacattttcctggga 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctttcaattcccttacagtgactcttcctcttactttttgccagccacattttcctggga 205
Query: 661 t 661
|
Sbjct: 204 t 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1062
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1052
Effective search space: 684852
Effective search space used: 684852
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no487_e15.g1 MSMg01no487_e15.g1 CHROMAT_FILE:
MSMg01no487_e15.g1 PHD_FILE: MSMg01no487_e15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:09:51 2005
(664 letters)
>mm_chr13_103252409_103253472
Length = 1064
Score = 1147 bits (593), Expect = 0.0
Identities = 647/665 (97%), Gaps = 2/665 (0%)
Strand = Plus / Plus
Query: 1 acctccttggaatgactgcaatctcaggagggtcacatatcttgacagtgatgtacaatt 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 acctccttggaatgactgcaatctcaggagggtcacatatcttggcagtgatgtacaatt 260
Query: 61 gtaactctcgcatatccatcagcttcacacagcttggaccacagcaaatgacagatgcag 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtaactctcgcatattcatcagcttcacacagcttggaccacagcaaatgacagatgcag 320
Query: 121 gtacaatttgatgctgagaacagaaattggaaagaaaccaacatcactgacttgacctgc 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtacaatttgatgctgagaagagaaattggaaagaaaccaacatcactgacttgacctgc 380
Query: 181 ccaagtgccctagagagcatgagatctgaatcaacatgatcaggacacagggtttttagt 240
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 ccaactgcactagagagcatgagatctgaatcaacatgatcaggacacagggtttctagt 440
Query: 241 ccctctcatcatggggccaatgatgtttatatatttgcttctgttgtctgtctctactag 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccctcccatcatggggccaatgatgtttatatatttgcttctgttgtctgtctctactag 500
Query: 301 taaataaaataaaattgaaaccgagtctacctgtaactggcagggcaaaggtccagcgtt 360
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 501 taaataaaataaaattgaaaccgagtctacctgtaacaggcagggcaaaggtccagcgtt 560
Query: 361 cccatccaaagcacatgtttcaggagctacaggtgctttgtcatttcattcttcttcacg 420
||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 561 cccatccaaagcacacgtttcaggagctacaggtgccttgtcatttcattcttctccacg 620
Query: 421 aaacaaaaggagttaaatgaattataattctctcctagagtaaataacttattgtcct-c 479
|||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||| |
Sbjct: 621 aaacaaaaggagttaaataaattataattctctcctagagtaaattacttattg-ccttc 679
Query: 480 cccctgtgatgcaggtccactgtgtgccaactttaggtatttcttcactgatgtttctaa 539
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cccctgtgacgcaggtccactgtgtgccaactttaggtatttcttcactgatgtttctaa 739
Query: 540 agagtttgactttggtggatcaaactctttcttcttgattttaaagatttgtataggtaa 599
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 740 agagtttggctttggtggatcaaactctttcttcttgattttaaagatttgtatagataa 799
Query: 600 atacctcacagactagagttctttttggacagttggacaacagctatatacgaaactctt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 atacctcacagactagagttctttttggacagttggacaacagctatatacgaaactctt 859
Query: 660 aatca 664
|||||
Sbjct: 860 aatca 864
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space: 689316
Effective search space used: 689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
