NTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTCTCCCTCTCTCTCTCTCCCTCTCCCTCCCTCTCTCCCTATT
TCCCTTTCTTCCTCTCTCCCTCTCTCTCTGTATCCCTTTAATATCCTTCT
CTCACTTTACTGTTCTGGCTACTTCTTAGAGCACAGCACTGACAAGGAGG
GGTTAGTGGGCAGCTGTATCTCATACCTTATTTCAATAGCATTGCTCATG
TAGGATGATGCTGGCCCTGGGTTTCTCATTCACTGCTTTTATCACGTTGG
GCATGCTCACTCTAGTCCTACTCTCTCTATGACTTTAATCATGAACCTAC
ATTGGATTAAGCTACTGCCTTTTTCTCAATTTATTAACATGATCATTTGA
CTTTTTTTTATCTTTAGGTCCATTTATGTGGTTTATTATACATTATTCAG
ATTCCAAGTATCCTTCTAAGCATTTTTTTTTTAATCTAAGAAGGACTGAC
TATATATCTTTGAAAGTCTGGTGTTGTGGGAAATATTTTTAAAAAAAAAA
TGAACCATCCTGAGTTAAACCCAGCTACTATCTTCCCTGGTGGGCTGGCC
AGCCATGCACTCACTGATGGGAAATGACCTAGCTGTTCTTATCTCATGGA
GACTCTCTAACTCAGAGCTCCAAAATCTCTCCACCTAGCTCACTAAGTTC
CCATACTGGGTCTCTACACACCAGCCCCATCCCTCAAAACCCCCATGGGC
TTTTGTGGTGACAGA

NNCCCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXATGAGCTTTTCTTCTATTTTTAG
AAACGATTTCCTGGCACTGTTCAATGAAAAGCCACAAAGAGGTAATAACC
AGAAGGTAATGAGCAAATATTCTCAGGTTGAGGCTGCCGACCTACAATCC
ATCAAATGGGATTCTTGGGTAATAGCTGATTTTTTGAGCTGGAGCAATAA
ATGTAACAGTTAGGTGAGAAAGTGAGGAAGCTATAAAATGCTAGTGCCTC
AATAGACAAGGGAATGGATGTTTAAAAGGTAAATTCTGGACTGGAGAGCA
TACAAGGCTGAAATACCACAATGCCATAGACCACAATGTTGGGATTCAAA
TTCTCCCAGGGATTTTGGAAGCCTCTGCTTCCAATTCAGATGGGACTAGC
TCTAGCAGGAAGCCCCCTTTCTGGCCAGTGAGAGTCTTCCAGTACTGGTC
TCTGTATCAGCACTGTATCAGACATATATAGTACACTAGGAAAAGGACAT
AGAACGCTTAACTTTCCAACAAGTGAATGACTTTCAGAAGTCACCCAAAC
TAGAAAACATGGCAGGAAACATTTCAAGTTGGCATCAGCTAACTTGAATT
AAGTCCTGTTTCAAGCGCCGACTGAAACAAACATTAACCAAGGAAGAGGA
AAGACAGAAACCCCCCNTCCTCACCCCCACCCCCGGAGACGGCAAACACT
TCC

Query= MSMg01no487_j23.g1 MSMg01no487_j23.g1 CHROMAT_FILE:
MSMg01no487_j23.g1 PHD_FILE: MSMg01no487_j23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:17 2005
         (612 letters)



>mm_chr13_17976125_17977139
          Length = 1015

 Score = 1129 bits (584), Expect = 0.0
 Identities = 607/616 (98%), Gaps = 5/616 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagcttttcttctatttttagaaacgatttcctggcactgttcaatgaaaagccacaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgagcttttcttctatttttagaaacgatttcctggcactgttcaatgaaaagccacaa 260

                                                                       
Query: 61  agaggtaataaccagaaggtaatgagcaaatattctcaggttgaggctgccgaccta-ca 119
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 261 agaggtaataaccagaaggtaatgagcaaatattctcaggttgaggctgccgac-taaca 319

                                                                       
Query: 120 atccatcaaatgggattcttgggtaatagctgattttttgagctggagcaataaatgtaa 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atccatcaaatgggattcttgggtaatagctgattttttgagctggagcaataaatgtaa 379

                                                                       
Query: 180 cagttaggtgagaaagtgaggaagctataaaatgctagtgcctcaatagacaagggaatg 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cagttaggtgagaaagtgaggaagctataaaatgctagtgcctcaatagacaagggaatg 439

                                                                       
Query: 240 gatgtttaaaaggtaaattctggactggagagcatacaaggctgaaataccacaatgcca 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gatgtttaaaaggtaaattctggactggagagcatacaaggctgaaataccacaatgcca 499

                                                                       
Query: 300 tagaccacaatgttgggattcaaattctcccagggattttggaagcctctgcttccaatt 359
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 500 tagaccacaatgttgggattcaaattctcccagggattttggaagcccctgcttccaatt 559

                                                                       
Query: 360 cagatgggactagctctagcaggaagccccctttctggccagtgagagtcttccagtact 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cagatgggactagctctagcaggaagccccctttctggccagtgagagtcttccagtact 619

                                                                       
Query: 420 ggtctctgtatcagcactgtatcagacatatatagtacactaggaaaaggacatagaacg 479
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 620 ggtctctgtatcagcactgtatcagacatatatagtacactaggaaaaggacatagaagg 679

                                                                       
Query: 480 cttaactttccaacaagtgaatgactttcagaagtcacccaaactagaaaacatggcagg 539
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cttaactttccaacaagtcaatgactttcagaagtcacccaaactagaaaacatggcagg 739

                                                                       
Query: 540 aaacatttcaagttggcatcagctaacttga---attaagtcctgtttcaagcgccgact 596
           |||||||||||||||||||||||||||||||   |||||||||||||||||||||| |||
Sbjct: 740 aaacatttcaagttggcatcagctaacttgatgaattaagtcctgtttcaagcgccaact 799

                           
Query: 597 gaaacaaacattaacc 612
           ||||||||||||||||
Sbjct: 800 gaaacaaacattaacc 815


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1015
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1005
Effective search space:   605010
Effective search space used:   605010
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)