Query= MSMg01no489_e03.b1 MSMg01no489_e03.b1 CHROMAT_FILE:
MSMg01no489_e03.b1 PHD_FILE: MSMg01no489_e03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:25 2005
(678 letters)
>mm_chr13_7971202_7972279
Length = 1078
Score = 1232 bits (637), Expect = 0.0
Identities = 669/687 (97%), Gaps = 13/687 (1%)
Strand = Plus / Plus
Query: 5 gaattcactaattatcttcttcattctgagaattaattaattttttcatttttatcctta 64
||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 192 gaattcactaaaaatcttcttcattctaagaattaattaattttttcatttttatcctta 251
Query: 65 ttgaacctcagcagttcaatattgtaactatttttgtggggctatactctgaagaaatag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 252 ttgaacctcagcagttcaatattgtaactatttttgtggggctatactctgaagagatag 311
Query: 125 acttgaatatgtctccttcatcacgtgattgaaacaggatgtctttttcttatttcctgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 acttgaatatgtctccttcatcacgtgattgaaacaggatgtctttttcttatttcctgt 371
Query: 185 agtcagaacggtatctaagtctcagagagatgaagtcataatgaagggaattaggagcag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 agtcagaacggtatctaagtctcagagagatgaagtcataatgaagggaattaggagcag 431
Query: 245 acaataaatgtcttaagttcctgacatagaaggaatataaagaataaactcatagaagat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 acaataaatgtcttaagttcctgacatagaaggaatataaagaataaactcatagaagat 491
Query: 305 acatatttagtctgataaggtacacacattttttttaatgtctaaaggctattttagtta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 acatatttagtctgataaggtacacacattttttttaatgtctaaaggctattttagtta 551
Query: 365 aagttacctctaaagtgaatgttctgctaacaaatttcgttggtttg------gtttttt 418
||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 552 aagttacctctaaagtgaatgttctgctaacaaatttcgttggtttgttttttgtttttt 611
Query: 419 tttttttt-------ggcatgtaattcaaggacacaatcatatacagttggaaaagtgac 471
|||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tttttttttttttttggcatgtaattcaaggacacaatcatatacagttggaaaagtgac 671
Query: 472 aagagctagaggtggatgctgttgagggcataactctacaatcatttttctatgtgagat 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 aagagctagaggtggatgctgttgagggcataactctacaatcatttttctatgtgagat 731
Query: 532 tctatgcaggatagagaaccacaaatgtcaggtttgatcactaaactcaaggttactgag 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 tctatgcaggatagagaaccacaaatgtcaggtttgatcactaaactcaaggttactgag 791
Query: 592 ttgagaatacttgagagattaaggtagcaataacccacctcctggaaactatttcccagt 651
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 792 ttgagaatacttgagagattaaggtggcaataacccacctcctggaaactatttcccagt 851
Query: 652 gattttgtgctaatgagaaacatgcag 678
|||||||||||||||||||||||||||
Sbjct: 852 gattttgtgctaatgagaaacatgcag 878
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1078
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1068
Effective search space: 713424
Effective search space used: 713424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no489_e03.g1 MSMg01no489_e03.g1 CHROMAT_FILE:
MSMg01no489_e03.g1 PHD_FILE: MSMg01no489_e03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:25 2005
(655 letters)
>mm_chr13_8151307_8152361
Length = 1055
Score = 1243 bits (643), Expect = 0.0
Identities = 652/655 (99%)
Strand = Plus / Minus
Query: 1 tactgaccaatctcagtgtctaaacactgggggaaaaagatctcattttcaaaaccttta 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 tactgaccaatctcagcgtctaaacactgggggaaaaagatctcattttcaaaaccttta 796
Query: 61 tcttccctgctatgattacataaattacccagtgggtaaggttactcaaatgacataacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 tcttccctgctatgattacataaattacccagtgggtaaggttactcaaatgacataacc 736
Query: 121 actatcacctctgtattgctatattgcattttttattgaaaagactgcaattatactaaa 180
|||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 735 actatcacctctctattgctatattgcattttttgttgaaaagactgcaattatactaaa 676
Query: 181 tacccatcttctaaatgcaaatgacagatgagcctctgagtttaaaaatattaatttctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tacccatcttctaaatgcaaatgacagatgagcctctgagtttaaaaatattaatttctt 616
Query: 241 gtaccatttaaaatgctattttatgatcattcttactaggttaatattgtgtgtgctggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gtaccatttaaaatgctattttatgatcattcttactaggttaatattgtgtgtgctggg 556
Query: 301 gtaggggcagaagacttagaggaaaagagagaagagaatgtggagacaggaaagagaatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gtaggggcagaagacttagaggaaaagagagaagagaatgtggagacaggaaagagaatg 496
Query: 361 aagtaaaaaggaaggaaagaattttaataaaggacagtgacgttatttaatcttcttatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aagtaaaaaggaaggaaagaattttaataaaggacagtgacgttatttaatcttcttatc 436
Query: 421 aagcaagtttcaaaatatgcttccaattcttaccacccaacttccttcatggcgtgtttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 aagcaagtttcaaaatatgcttccaattcttaccacccaacttccttcatggcgtgtttg 376
Query: 481 gctttatgctgagcagaattcagaagatcctattaatgaagatggtttaatgcctgtgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gctttatgctgagcagaattcagaagatcctattaatgaagatggtttaatgcctgtgca 316
Query: 541 ttattataatggacgcctttgttctcacgctccttcccctgtcatatgctaagtcattaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ttattataatggacgcctttgttctcacgctccttcccctgtcatatgctaagtcattaa 256
Query: 601 tcagtgggtgctgaaaaaataattgtctacttcttaacaattgtctattgttgaa 655
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tcagtgggtgctgaaaaaataattgtctacttcttaacaattgtctattgttgaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
