Query= MSMg01no490_g07.b1 MSMg01no490_g07.b1 CHROMAT_FILE:
MSMg01no490_g07.b1 PHD_FILE: MSMg01no490_g07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:58 2005
(574 letters)
>mm_chr13_36991510_36992482
Length = 973
Score = 978 bits (506), Expect = 0.0
Identities = 563/597 (94%), Gaps = 25/597 (4%)
Strand = Plus / Plus
Query: 1 atggatgctataaactatctctaaatgctaattacatggcaggccatgggatgtgtacct 60
||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||
Sbjct: 177 atggatgctataaactatcactaaatgctaattacatggcaggccatggaatgtgtgcct 236
Query: 61 gcttgcaacagctctgctaagccccataacaactacaaggtaggcactatgaataccatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 gcttgcaacagctctgctaagccccataacaactacaaggtaggcactatgaataccatc 296
Query: 121 agtgatataagggtatgtacattacagggctgtgtgtatgtgtgtgctataaacttcttt 180
|||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 297 agtgatataagggtatgtacattacagggctgtgtgtatgtgcgtgttataaacttcttt 356
Query: 181 tgtcaagactgtgagaatgtgccagaaacaatcagtctagaactagaattggctccagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tgtcaagactgtgagaatgtgccagaaacaatcagtctagaactagaattggctccagca 416
Query: 241 tanngt-aatgaagccagtggaggaagacaggaagggaaggaaggaggaagagcccagcc 299
|| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tat-gttaatgaagccaatggaggaagacaggaagggaaggaaggaggaagagcccagcc 475
Query: 300 ttgaaaattcagtaaactactttatagcagtgatcaactggcaaacaggtccgtgagaag 359
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ttgaaagttcagtaaactactttatagcagtgatcaactggcaaacaggtccgtgagaag 535
Query: 360 gagaacattaacaattatcactttggatgaaggccaagtatgcatttagccaaagcacag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 gagaacattaacaattatcactttggatgaaggccaagtatgcatttagccaaagcacag 595
Query: 420 gaagtccattggagcagcaaaccaagaaccagagaggggag------------------- 460
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 gaagtccattggagcagcaaaccaagaaccagagaggggagagaaccaagaaccagagag 655
Query: 461 ----cctagggagagaggagctgagctggcccaggtgagagagagaggcagagcaaggct 516
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 656 ggggcctagggagagaggagctgagctggcccaggtgagagagagaggcagagcgaggct 715
Query: 517 tgctctgagcaacctgagaggctggtctgacagcgcaaactccaccttcctcctgtc 573
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 tgctctgagcaacctgagaggctggtctgacagcgcaaactccaccttcctcctgtc 772
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 973
Length adjustment: 10
Effective length of query: 564
Effective length of database: 963
Effective search space: 543132
Effective search space used: 543132
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no490_g07.g1 MSMg01no490_g07.g1 CHROMAT_FILE:
MSMg01no490_g07.g1 PHD_FILE: MSMg01no490_g07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:58 2005
(652 letters)
>mm_chr13_37164845_37165896
Length = 1052
Score = 1230 bits (636), Expect = 0.0
Identities = 648/652 (99%)
Strand = Plus / Minus
Query: 1 tcttgtggtgaagggagaggaaatgtgaaacaaaatcctttctgataaccactttaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 tcttgtggtgaagggagaggaaatgtgaaacaaaatcctttctgataaccactttaaaat 793
Query: 61 gcagtaaaagttaccagaggtccttgaggagcgactaaaaagcagcaagtggtgggcagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 gcagtaaaagttaccagaggtccttgaggagcgactaaaaagcagcaagtggtgggcagt 733
Query: 121 gtatacctggaggaaggaaatgctgataggcagcttacctaaatgcaggcattgagaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 gtatacctggaggaaggaaatgctgataggcagcttacctaaatgcaggcattgagaacc 673
Query: 181 agatgtgtacaagccagctgtcttatgattgatggagggtcagaagacagtgcccagggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 agatgtgtacaagccagctgtcttatgattgatggagggtcagaagacagtgcccagggc 613
Query: 241 caccacatcatctggaaaatgagggggaaatctggcaaaacaaagagtgtagaagaaaac 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 612 caccacatcatctggaaaatgagggggaaatctggcaaaacagagagtgtagaagaaaac 553
Query: 301 acccaaattatgtgaataaaatctactcaaacctttggatgacccttaaagtatatattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 acccaaattatgtgaataaaatctactcaaacctttggatgacccttaaagtatatattc 493
Query: 361 atgaactaaacaccaaaacttcaagatgtcactctgatgcaaaaataagcagagacttca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 atgaactaaacaccaaaacttcaagatgtcactctgatgcaaaaataagcagagacttca 433
Query: 421 gccactgctgactgtaaatgatacaggatttaaactttgagttgaattatgtgaaataat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gccactgctgactgtaaatgatacaggatttaaactttgagttgaattatgtgaaataat 373
Query: 481 ttctaaaatgaaatgaacttggtagaatccataacttctataaattatcataattcaaca 540
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ttctaaaatgaaatgaactcggtagaatccataacttctataaattatcataattcaaca 313
Query: 541 taggattactataactgtaaagaaatagctggcaggactacaatcaagagaaaataaatg 600
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 312 taggattactataactgtaaagaaatagctggcaggaccacaatcaagagaaaataaatg 253
Query: 601 aacagaaaaatggatgacttaggtactaaaattaacatataactgttctttt 652
||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 252 aacagaaaaatggatgacttaggtactaaaattaacagataactgttctttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
