Query= MSMg01no491_b05.b1 MSMg01no491_b05.b1 CHROMAT_FILE:
MSMg01no491_b05.b1 PHD_FILE: MSMg01no491_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:52 2005
(702 letters)
>mm_chr13_67688178_67689279
Length = 1102
Score = 619 bits (320), Expect = 0.0
Identities = 332/338 (98%), Gaps = 6/338 (1%)
Strand = Plus / Minus
Query: 6 gaattccttatacgattttc--ttga-aggattccccagtcatcaaaaagacttgatgga 62
||||||||||||||| || |||| |||||||||||||||||||||||||||||||||
Sbjct: 335 gaattccttatacga---tcctttgacaggattccccagtcatcaaaaagacttgatgga 279
Query: 63 cactcctaacctgggctctgtgactaatatttgcgtgtagtttggtgtgtgtccattttc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 cactcctaacctgggctctgtgactaatatttgcgtgtagtttggtgtgtgtccattttc 219
Query: 123 caccatctttcagggtaagcccttatatacttacgtgtttgaatgtttgtcccatagaga 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 caccatctttcagggtaagcccttatatacttacgtgtttgaatgtttgtcccatagaga 159
Query: 183 gtggcactactaggatgtgtggccttcttgcaggatgtgtgtcgctgatgtggatgagag 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gtggcactactaggatgtgtggccttcttgcaggatgtgtgtcgctgatgtggatgagag 99
Query: 243 ctttgagttctatacacaatatatgcctattggtaaaaacagaaattccagcagtttaat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 ctttgagttctatacacaatatatgcctattggtaaaaacagaaattccagcagtttaat 39
Query: 303 tttacaaatgaaaactcaagagccagataccttggtga 340
||||||||||||||||||||||||||||||||||||||
Sbjct: 38 tttacaaatgaaaactcaagagccagataccttggtga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 702
Length of database: 1102
Length adjustment: 10
Effective length of query: 692
Effective length of database: 1092
Effective search space: 755664
Effective search space used: 755664
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no491_b05.g1 MSMg01no491_b05.g1 CHROMAT_FILE:
MSMg01no491_b05.g1 PHD_FILE: MSMg01no491_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:52 2005
(680 letters)
>mm_chr13_67578782_67579861
Length = 1080
Score = 1307 bits (676), Expect = 0.0
Identities = 676/676 (100%)
Strand = Plus / Plus
Query: 5 aattccaggcaaaactccagaaccctagaggccatgccagcacccacaaacctggagatc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 aattccaggcaaaactccagaaccctagaggccatgccagcacccacaaacctggagatc 264
Query: 65 acccaggctttcaaaaccccaatggaagcaccatcatgaaccagtagactaacctgccac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acccaggctttcaaaaccccaatggaagcaccatcatgaaccagtagactaacctgccac 324
Query: 125 tataaatataggccactgaggccagaagagcagaaagaaaatagaaactatggtggggaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tataaatataggccactgaggccagaagagcagaaagaaaatagaaactatggtggggaa 384
Query: 185 aaaaaaaccccatgaagtaataagacaaatgcagaaatcagcacctaaacttctaattac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaaaaaaccccatgaagtaataagacaaatgcagaaatcagcacctaaacttctaattac 444
Query: 245 cccaaacccagatgcctagaggccagtgtaaagacaaaccaccagcctaggcaatatgtc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cccaaacccagatgcctagaggccagtgtaaagacaaaccaccagcctaggcaatatgtc 504
Query: 305 accaccagagctcagctatcttactacagcaagccctgaatttcccaacacagctgaagc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 accaccagagctcagctatcttactacagcaagccctgaatttcccaacacagctgaagc 564
Query: 365 acaagaagaaaactctttaaaacccaccaatgaagattaaaatagaggtccttaaaaagg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 acaagaagaaaactctttaaaacccaccaatgaagattaaaatagaggtccttaaaaagg 624
Query: 425 aaatgaatacatcccttaatgaaattcataaaaatacaattggaggaaatcaatacatct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaatgaatacatcccttaatgaaattcataaaaatacaattggaggaaatcaatacatct 684
Query: 485 cttaaggaaagcaaatataaataaataaatgaacgaacaaaggggtaaaggaaatgaatg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cttaaggaaagcaaatataaataaataaatgaacgaacaaaggggtaaaggaaatgaatg 744
Query: 545 aaactgttccaagactcgaaaacaaaaatagaaataaagacaacacaaactgccagaatc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aaactgttccaagactcgaaaacaaaaatagaaataaagacaacacaaactgccagaatc 804
Query: 605 caggagataggaaatctaggcatgttaacaggaactacagatgcaagcagcaccagcaga 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 caggagataggaaatctaggcatgttaacaggaactacagatgcaagcagcaccagcaga 864
Query: 665 acactagagagaatct 680
||||||||||||||||
Sbjct: 865 acactagagagaatct 880
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1080
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1070
Effective search space: 716900
Effective search space used: 716900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
