XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAAGGCCT
TTACTAAACATGATAAAAGCAATCTACAGCAAACCAGTAGCCAACATCAA
AGTAAATGGAGAGAAGCTGGAAGCAATCCCACTAAAATCAGGGACTAGAC
AAGGCTGCCCACTTTCTCCCTACCTTTTCAACATAGTACTTGAAGTATTA
GCCAGAGCAATTCGACAACAAAAGGAGATCAAGGGGATACAAATTGGAAA
AGAGGAAGTCAAAATATCACTTTTTGCAGATGATATGATAGTATATATAA
GTGACCCTAATATTTCTACCAGAGAACTCCTAAACCTGATAAACAGCTTC
GGTGAAGTAGCTGGATATAAAATAAACTCAAACAAGTCAATGGCCTTTCT
CTATACAAAGAATAAACAGGCTGAGAAAGAAATTAGGGAAACAACACCCT
TCTCAATAGTCACAAATAATATAAAATATCTCGGCGTGACTCTAACTAAG
GAAGTGAAAGATCTGTATGATAAAAACTTCAAGTTTCTGAAGAAAGAAAT
TAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATAGATTGGCA
GGATCAACATTGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTC
AATACAATCCCCATCAAAATTCCAACTCAATTCTTCAATGAATTAGAAGG
AGCAATTTGCAAATTCATCTGGAATAACAAAAAACCTAGGATAGCN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXTTTTTAACTTTGTGTACTAGAGGTATCTCCAGCAGGA
TCCTTAGATTTCTGACTAAATAAATTACACTGGACTTGCAATATTATTCT
TAAGCAAAAAATCACTCAAAAGAGTAAGTAAATGATGCTATTATTTCTAT
GTTAGTGTTTTTCTATACAGAAATATATTGTTATGTTAGGCATATAGCTC
AGTGATATTGTGTTTATATAGTATGTTTGAGGACCTGGTTCATTTCCCAG
TAATATATACACACACTCATGTACACGTGCACGCATGCGCGAGCACACAC
ACACACACACACACACACACACAAACATACACACACACACACACACACAC
ACACACACACACACAAAATCTTTCTATCTACCTATCTATCTATCCATCTG
CATACACATAATGTTATATGTAATCATAATCATTGTGTGTTGCTATGTAG
GAATTATATTCCAATAAATCACTTTTCATATGTAATGTTTATGCATAAAA
ATATAATTAGCCTTTATATATTTGCTATCTGTGTTGGATAGTCTTATGTC
AACTTGATACAGTCTAGACTCATCTGGAGGAGAGAATCCCAATAAGAAAA
TGCCTATATAGAAGCAGGGGGAGGGGGAATGGGAATAGGGAGTTTCCAGT
GGGGGTAGCGGGACTGGGAAAGGGGATAACATTTGTAATTTTAATAAAGA
AACTATC

Query= MSMg01no491_d16.g1 MSMg01no491_d16.g1 CHROMAT_FILE:
MSMg01no491_d16.g1 PHD_FILE: MSMg01no491_d16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:05 2005
         (617 letters)



>mm_chr13_77871747_77872763
          Length = 1017

 Score = 1100 bits (569), Expect = 0.0
 Identities = 600/621 (96%), Gaps = 18/621 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttttaactttgtgtactagaggtatctccagcaggatccttagatttctgactaaataa 60
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 tttttaactttgtgtactagaggtatctccagcaggatcctcagatttctgactaaataa 260

                                                                       
Query: 61  attacactggacttgcaatattattcttaagcaaaaaatcactcaaaagagtaagtaaat 120
           |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 attatactggacttgcaatattattcttaagcaaaaaaacactcaaaagagtaagtaaat 320

                                                                       
Query: 121 gatgctattatttctatgttagtgtttttctatacagaaatatattgttatgttaggcat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatgctattatttctatgttagtgtttttctatacagaaatatattgttatgttaggcat 380

                                                                       
Query: 181 atagctcagtgatattgtgtttatatagtatgtttgaggacctggttcatttcccagtaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atagctcagtgatattgtgtttatatagtatgtttgaggacctggttcatttcccagtaa 440

                                                                       
Query: 241 tatatacacacactcatgtacacgtgcacgcatgcgcgagcacacacacacacacacaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatatacacacactcatgtacacgtgcacgcatgcgcgagcacacacacacacacacaca 500

                                                                       
Query: 301 cacacacacaaacatacacacacacacacacacacacacacacacacacacaaaatcttt 360
           ||||||||||||||              ||||||||||||||||||||||||||||||||
Sbjct: 501 cacacacacaaaca--------------cacacacacacacacacacacacaaaatcttt 546

                                                                       
Query: 361 ctatctacctatctatctatccatctgcatacacataatgttatatgtaatcataatcat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ctatctacctatctatctatccatctgcatacacataatgttatatgtaatcataatcat 606

                                                                       
Query: 421 tgtgtgttgctatgtaggaattatattccaataaa----tcacttttcatatgtaatgtt 476
           |||||||||||||||||||||||||||||||||||    |||||||||||||||||||||
Sbjct: 607 tgtgtgttgctatgtaggaattatattccaataaacaaatcacttttcatatgtaatgtt 666

                                                                       
Query: 477 tatgcataaaaatataattagcctttatatatttgctatctgtgttggatagtcttatgt 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 tatgcataaaaatataattagcctttatatatttgctatctgtgttggatagtcttatgt 726

                                                                       
Query: 537 caacttgatacagtctagactcatctggaggagagaatcccaataagaaaatgcctatat 596
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 caacttgatacagtctagactcatctggaggagagaatcccaataagaaaatgcctatat 786

                                
Query: 597 agaagcagggggagggggaat 617
           |||||||||||||||||||||
Sbjct: 787 agaagcagggggagggggaat 807


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 86
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space:   611249
Effective search space used:   611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)