TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
CATGGTTTCCAGGCGTGGTGGCGCACGCCTTTAATCCCAGCACTTGGGGG
GCAGAGGCAGGTGGATTTCTGAGTTCGAGGACAGCCTGGTCTACAAAGTG
AGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAAGAA
GAAAAAGAATTCCACGGGACTGTGGGCTTCCATGGGGCCCATGACATAGG
TGGATCTAAAGGGACTGTCTCCCTGTCTCCCTTTAGACTCCTCTCCCCAG
AGAACTCTTTTTTGAACTGGCTCTACCTTCTGGCCTGGCAGGACTCAAAG
CCCTCACCCTCCTCACTATACTTGGTTCACATTACCAGGAGGTCTAAGTA
TGAGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGCATC
TGTCTGTCTGTCTGTCTGTCTGAGTTGAGTATTATCCTATCCTAAGAGCT
TTGCAAATCATTGACCTACATCATAAATAGACAGGGTGGTCAGCTGCTAA
TTCTATATAAATAACTTTTATGATAAAAACCATGATGTAATTTTTGGCAA
ATAAGAAAAAGTAAAGTCGGAGAAAAATCTTTATAATAACAGAGCCTCAC
TGCTAAACAATTTTCTATTGTGCTGTGTATGGGGACCGAAATTGTTACCC
TCTCCCTCCTTGGATTGGN

AATGGAGGCTGGCGGCGCCTGGCTCCTAATATAGGTGAACTATAGAAGTT
TCCCGGAATCCAGGAAGCCAGGTTACACAGAGAAACCTGTCTCGAAAACC
AAAAAAAAAAATCTCATTTTTATTCTGCCTTCNCACAGGTACTTTACTAA
CCATTTATTCTAACTATGGATTCTAAACGAGGAAAATATGTGCAAAGGGA
AAATTCCCCATAAACCCCTTAAATGGCCGTGTTGTTNCCAAGGACGGGNN
TAACTTTANNNNNNNGCTGCCGCGCAGGGGGGGTTTGGGGGCGGGGGCTN
NNNCGNTCCTCCAGTNNNACGAAATTTTTTCTTTACCCAATGGGGCGGGC
GGGGGGGGTNNNNNNNNNNNNNNNNNAAAAATTATGGGNNNNNNNNNNCT
NNNNGGGGGGGGGGGGNCNNNNNNNNNNNNNNNNNGGGGGGGGGGNNNNT
CCCCNNNNNNNNNNNNNNAANNNNTNTANNNNNNNNNNNNTNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNTNTTNTNNTNTNNNTTNTTNNGG
GGGTTTCCTNTTNNTNNNTNTTNNNTNNTNNTTNNNNNTTTTTTTTTTTT
TTTNNNNNTTTTTTTTTTATNNTTTTNTNTTTTTNNTTTTTTNNNATTTT
TTATTGTTTGTTGTTTGTG

Query= MSMg01no492_j15.b1 MSMg01no492_j15.b1 CHROMAT_FILE:
MSMg01no492_j15.b1 PHD_FILE: MSMg01no492_j15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:52 2005
         (417 letters)



>mm_chr13_99483999_99484815
          Length = 817

 Score =  727 bits (376), Expect = 0.0
 Identities = 412/434 (94%), Gaps = 17/434 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtggcgcacgcctttaatcccagcacttggggggcagaggcaggtggatttctgagttcg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtggcgcacgcctttaatcccagcacttggggggcagaggcaggtggatttctgagttcg 260

                                                                       
Query: 61  aggacagcctggtctacaaagtgagttccaggacagccagggctatacagagaaaccctg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggacagcctggtctacaaagtgagttccaggacagccagggctatacagagaaaccctg 320

                                                                       
Query: 121 tctcgaaaaagaagaaaaagaattccacgggactgtgggcttccatggggcccatgacat 180
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 tctcgaaaaagaagaaaaagaattccacgggactgtgggtttccatggggcccatgacat 380

                                                                       
Query: 181 aggtggatctaaagggactgtctccctgtctccctttagactcctctccccagagaactc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggtggatctaaagggactgtctccctgtctccctttagactcctctccccagagaactc 440

                                                                       
Query: 241 ttttttgaactggctctaccttctggcctggcaggactcaaagccctcaccctcctcact 300
           |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttgctgaactggctctaccttctggcctggcaggactcaaagccctcaccctcctcact 500

                                                                       
Query: 301 atacttggttcacattaccaggaggtctaagtatgagcgtgtgtgtgtgtgtgtgtgtgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atacttggttcacattaccaggaggtctaagtatgagcgtgtgtgtgtgtgtgtgtgtgt 560

                                                                       
Query: 361 gtgtgtgtgtgtgtgt---------atgcatctgt--------ctgtctgtctgtctgtc 403
           ||||||||||||||||         ||| || |||        |||||||||||||||||
Sbjct: 561 gtgtgtgtgtgtgtgtgtgtggtgtatgtatgtgtgtatgcatctgtctgtctgtctgtc 620

                         
Query: 404 tgagttgagtatta 417
           ||||||||||||||
Sbjct: 621 tgagttgagtatta 634


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 817
Length adjustment: 9
Effective length of query: 408
Effective length of database: 808
Effective search space:   329664
Effective search space used:   329664
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)