Query= MSMg01no493_i02.b1 MSMg01no493_i02.b1 CHROMAT_FILE:
MSMg01no493_i02.b1 PHD_FILE: MSMg01no493_i02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:04 2005
(639 letters)
>mm_chr13_74127776_74128814
Length = 1039
Score = 1156 bits (598), Expect = 0.0
Identities = 626/638 (98%), Gaps = 7/638 (1%)
Strand = Plus / Minus
Query: 5 gaattctctacta--tttc--tacctgtgattgacactatagaccatgtgcccttgcttg 60
||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 856 gaattctctactaag---caatacctgtgattgacactatagaccatgtgcccttgcttg 800
Query: 61 tacttgtgactggttcagtatcacataggactaagacaataaccatgttctctgaaactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 tacttgtgactggttcagtatcacataggactaagacaataaccatgttctctgaaactt 740
Query: 121 gggctgtgatatgccaaaacagaccagtgtctgtttattatctatatccacactgttagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gggctgtgatatgccaaaacagaccagtgtctgtttattatctatatccacactgttagg 680
Query: 181 ttgtcatagaaacagtttctgtatctgaaagtacagacactcaagaaaccccagagtgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ttgtcatagaaacagtttctgtatctgaaagtacagacactcaagaaaccccagagtgtg 620
Query: 241 tcaagtccttgggtgaatgtatgtgttgacaggagccagtcgtgataaggaccccaaagc 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 619 tcaagtccttgggtgaatgtatgtgttgacaggagccaatcgtgataaggaccccaaagc 560
Query: 301 ctcagacatggcaaagccttctcactaggatcgggctcagagggatgtcacagtgttcct 360
||||||| | |||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 559 ctcagacctagcaaagccttctcactaggatcgggctcagagggatgtcagagtgtttct 500
Query: 361 caggggacctagtacaaatgctgacagtgtatgcagaatatgtccactatagctctctcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 caggggacctagtacaaatgctgacagtgtatgcagaatatgtccactatagctctctcc 440
Query: 421 ctcctggataattatggcatgaagaatgccacccccccacacctcatggaggcttctctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ctcctggataattatggcatgaagaatgccacccccccacacctcatggaggcttctctc 380
Query: 481 actgatattaactaaatctgtaccctcgatccagatgtagatgataaaccctgcctcttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 actgatattaactaaatctgtaccctcgatccagatgtagatgataaaccctgcctcttt 320
Query: 541 actatctgtaagcagtaaccctgtctccttaactagctgtatgcaataacgccgcctttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 actatctgtaagcagtaaccctgtctccttaactagctgtatgcaataacgccgcctttt 260
Query: 601 tgctcaactctatgtaataaacatgctgagcctctagg 638
||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tgctcaactctatgtaataaacatgctgagcctctagg 222
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no493_i02.g1 MSMg01no493_i02.g1 CHROMAT_FILE:
MSMg01no493_i02.g1 PHD_FILE: MSMg01no493_i02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:04 2005
(590 letters)
>mm_chr13_73954897_73955886
Length = 990
Score = 899 bits (465), Expect = 0.0
Identities = 564/607 (92%), Gaps = 19/607 (3%)
Strand = Plus / Plus
Query: 1 ggtaatgattacgagttcaggcataggggtgtcattgggaacagacagacacagagaaga 60
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 186 ggtaatgattacaagttcaggcataggggtgtcattgggaacagacagacacagagaaca 245
Query: 61 gctcgggcatatatccagagtcctaacaacaggttctatggcaagtatgaagcttaggca 120
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gctcaggcatatatccagagtcctaacaacaggttctatggcaagtatgaagcttaggc- 304
Query: 121 aggcggtgtagtctttgtagcctgctacaccttgcagatggga-tttagtgaatattgtt 179
|||||||||||||||||||||||| |||||||||||||||||| ||| |||||||| |||
Sbjct: 305 aggcggtgtagtctttgtagcctgttacaccttgcagatgggacttt-gtgaatatcgtt 363
Query: 180 tgcctttggggtaaacaccgtgctgcaggttccagatgtctggcagtaactgataccttc 239
||||||||||| ||||||| |||||||| ||||||||||||| ||||||||||| |||||
Sbjct: 364 tgcctttgggggaaacaccatgctgcagtttccagatgtctgtcagtaactgatcccttc 423
Query: 240 tgcttaggacaccaggaacagaaagggcaccaccccagaatacccctgaggagggacttg 299
|||||||||||| |||||||| ||||||| ||||||||||||||||||||||||| ||||
Sbjct: 424 tgcttaggacactaggaacaggaagggcagcaccccagaatacccctgaggaggggcttg 483
Query: 300 gttcactgacaaatcacatccatgatgatatcactgtagtgaggaaccccagtgctgggg 359
| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 484 gctcactgacaaatcacatccatgatgatatcactgtagtgaggaaccccagggctgggg 543
Query: 360 atctgcacacaggccacttcatcaaaggccacaaaaacatgcagctgtgaacaggcccaa 419
||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 544 atcagcacacaggccacttcatcaaaggtcacaaaaacatgcagctgtgaacaggcccaa 603
Query: 420 gggaaaagcagag----------------aggtacaaagagtatgctctgtcacctagag 463
||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 604 gggaatagcagagtggacttgcaggcggaaggtacaaagagtatgctctgtcacctagag 663
Query: 464 tagaacaagggccaggcagcagatgctcttgagctgcccagcaaaggcctgagctgtgtt 523
||||||||||| |||||||||| | |||||||||||||||||||||||||| ||||||||
Sbjct: 664 tagaacaagggacaggcagcaggtcctcttgagctgcccagcaaaggcctgggctgtgtt 723
Query: 524 agttcacatggggatggtccaatggatgatgtcaaagacacacactccttattggttcta 583
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 724 agttcacatggggatggtccaatggatgatgtcaaagacacagactccttattggttcta 783
Query: 584 aagccag 590
|||||||
Sbjct: 784 aagccag 790
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space: 568400
Effective search space used: 568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
