TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCGCGGAA
TTCAAGGAAATCTCTGGCCAAGAGGTAAGTAAAGAATCAGTAAGAAACAG
CCTTCTTAGCAAAATCAGTTGTTGGAGGATGGTTTTGCTCACCGAGTAAG
TGTTGTCTTTGTATTTTTAATTGCTGATTCCTGGCAGAGATTATGATTAG
AATCCATATTCTTACCCATTGCTTTCATATGTGTATTATAATGAAAGAAA
ACAAGAGGCATAGGCTGAGTCCTATTTTTTTTCCCTTGGGGAATAAAAGA
CTTTACATTCTTTGTCTTGAAACTGAAGAAGAACGAAGACCAAAGTGTGG
ACACTTTGCCCCTTCTTAGAGTTGGAAACAATCACCCATGGAAGGAGTTA
CAGAGACAAAGTTTGGAGCTGAGACAAAAGGATGGACCATCAAGAGACTG
CCATATCCAGGGATCCATCCCATAATTAGCCTCCAAATGATGACACCGTT
GCATACACTAGCAAGCATTTGGTGCAAGGACCGTGATATAGCCGTCTCTT
GTGAGACTATGCCGGGGCCTAACAAACACAGAAGTGGATGCTCACAGTCA
ACTATTGGATGGATCACAGGGCCCCCAATAGAGGAGCTAGAGAAAGTACC
CAAGGAGCTAAAGGGATCTGCACCCCTATAGGTAGAAACACATTATGAAC
TAAGCAGTACCCCGGAGCTCTTGTCTCTAGCTGCGTACGTAN

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCAAATGGCAGAGA
AGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATC
AAAACAACCCTGAGATTCCACCTCACACCAGTTAGAATGGCTAAGATCAA
AAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACAC
TCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCA
GTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGC
AATACTTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGG
ACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGC
TGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTG
GTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTA
TGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAG
GTAACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAGTGG
ATATTAGCCCAAAACGTAGTATACCCAAGATATAAGATACAATTTCCTAA
ACACATGAAACTCAAGAAAAATGAAAACTGAGTGTGGACACTAT

Query= MSMg01no493_i12.b1 MSMg01no493_i12.b1 CHROMAT_FILE:
MSMg01no493_i12.b1 PHD_FILE: MSMg01no493_i12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:06 2005
         (612 letters)



>mm_chr13_116227875_116228886
          Length = 1012

 Score = 1100 bits (569), Expect = 0.0
 Identities = 599/609 (98%), Gaps = 2/609 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaaggaaatctct-ggccaagaggtaagtaaagaatcagtaagaaacagccttct 63
           ||||||||||||| | || ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 205 gaattcaaggaaacc-cttggccaagaggtaagtaaagaatcagtaagaaacagccttgt 263

                                                                       
Query: 64  tagcaaaatcagttgttggaggatggttttgctcaccgagtaagtgttgtctttgtattt 123
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tagcaaaatcagttgctggaggatggttttgctcaccgagtaagtgttgtctttgtattt 323

                                                                       
Query: 124 ttaattgctgattcctggcagagattatgattagaatccatattcttacccattgctttc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttaattgctgattcctggcagagattatgattagaatccatattcttacccattgctttc 383

                                                                       
Query: 184 atatgtgtattataatgaaagaaaacaagaggcataggctgagtcctattttttttccct 243
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 384 atatgtgtattataatgaaagaaaacaagaggcataggctgagtcctactttttttccct 443

                                                                       
Query: 244 tggggaataaaagactttacattctttgtcttgaaactgaagaagaacgaagaccaaagt 303
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tggggaataaaagacttttcattctttgtcttgaaactgaagaagaacgaagaccaaagt 503

                                                                       
Query: 304 gtggacactttgccccttcttagagttggaaacaatcacccatggaaggagttacagaga 363
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 504 gtggacactttgccccttcttagaattggaaacaatcacccatggaaggagttacagaga 563

                                                                       
Query: 364 caaagtttggagctgagacaaaaggatggaccatcaagagactgccatatccagggatcc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 caaagtttggagctgagacaaaaggatggaccatcaagagactgccatatccagggatcc 623

                                                                       
Query: 424 atcccataattagcctccaaatgatgacaccgttgcatacactagcaagcatttggtgca 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atcccataattagcctccaaatgatgacaccgttgcatacactagcaagcatttggtgca 683

                                                                       
Query: 484 aggaccgtgatatagccgtctcttgtgagactatgccggggcctaacaaacacagaagtg 543
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 684 aggaccgtgatatagccgtctcttgtgagactaggccggggcctaacaaacacagaagtg 743

                                                                       
Query: 544 gatgctcacagtcaactattggatggatcacagggcccccaatagaggagctagagaaag 603
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 744 gatgctcacagtcaactattggatggatcacagggcccccaatggaggagctagagaaag 803

                    
Query: 604 tacccaagg 612
           |||||||||
Sbjct: 804 tacccaagg 812


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1012
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1002
Effective search space:   603204
Effective search space used:   603204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)