NNAAAAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXTATCAGAGAGGA
GCCGCGGAATTCAAGGGTTTCGAGGCGGAAGTGGGTGAGTGGGTAGGTGA
ACACCCTCATAGAAGCAGTGGAAGGAGGGATGGAACAGGGGGTTTCTGGA
GGGGAAGCCAGGAAAGGGGATAACATTTGAAATGTAAATATAGAAAATAT
CCAATAAAAGAAAAGAAAAAAATAAAGAATACCAAATAAAGTCCCCCAAC
ACAGAGTCTTTGGCCTGCACAATAAGGACGTGGGGAGAAGCAACTATACC
AAGTACTCTTTGGCTAACACAGTATTTTTTACTGAGACGTTAGGGAAAAG
GAAGTAAAATAATGTCAGGAGACACAAAATGGGAATTCACTTCTGGGTCA
TAAAAAAGGAAATAATGAGTTAGTCTAGCTTCTTATACCAAAATCCACCA
ATTAATTCATCCAAAAGTTCGAAATGAAACAGACGTACAGGGCACCGTGC
TTCTTCACTATGTAGCACAGGCTAGTCTTCCTATCTCAGTTACACCTGTG
CACCACTATACCTAGCTTCCTTAGCTATCCTTCCTCGGTGCTACAATGTA
TACTTTTCTCACTCTAGGCATTGAGTTAAGGATCAATGCTTTCTTTGGGA
AAGTTAAGAGCCACATGATTACTACACTGATTAAATTGTTACAGATATCA
AAGACAGCGTTTCACATTTATAAGACAACACTTTTACTATTATACAATTG
TATTTAAACAAG

NTGGCTCAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGGACAGCCAGGGCTACACA
GGAGAAACCCTGTCTCGGAAAAAAAACCAAAAAAACAAAAAACCAAAAAA
GACAGCCATGCAGTTTCTGCAGATCAGGAAGTCAGTAGCAACTTTGCTAG
GTGGCTTGATGACTGCGAAGATGTCCACAAAAGTGATCTATCTTTATTGC
AGGTAGGCCCAGGGCAGGAAGACTGCCTGAAGATGACACTGTCATATACA
GCAAGCTGGTGGCATAAGGCTTTTGTTCTTCCCCATGAGGACTTCTTCAC
AGGCCTGCTTTAGTGTCCTCATGAACATGGCTGATGACTTCTTCAAAGTG
ATCCAAGAGAGAAAACCACAAATGTTAAATAACATAGCCCCCTTGTGATG
ACTGGAATGAGAACGGCCCCCATCTGCTCGTATATTTGGATATTTGGTCC
CTAGTTATCGGACTGTTTACGAGGGATTTGGAGGTGTGCCCTTGGAAGAG
GTGTGTCACTCAGGGTGGGCTTCGAAGTTTCCAAACTGGATGCACTCCCA
GTGTCACTCTCTTTCTCTGCCTACAACTTGGCAGATCAAACGTGAGCTCT
CAGCTCCTGCTCCAGCACCATACCTTCAGCCTGCTGTCAGGATTCCCAAC
ATAATGCTCATGGAGTAACTCCCTAAAACTTTAAGCAAGCCCACCGTGCC
T

Query= MSMg01no497_d09.b1 MSMg01no497_d09.b1 CHROMAT_FILE:
MSMg01no497_d09.b1 PHD_FILE: MSMg01no497_d09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:49 2005
         (638 letters)



>mm_chr13_29823263_29824301
          Length = 1039

 Score = 1181 bits (611), Expect = 0.0
 Identities = 632/643 (98%), Gaps = 9/643 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   cggaagtgggtgagtgggtaggtgaacaccctcatagaagcagtggaaggagggatggaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cggaagtgggtgagtgggtaggtgaacaccctcatagaagcagtggaaggagggatggaa 260

                                                                       
Query: 61  cagggggtttctggaggggaagccaggaaaggggataacatttgaaatgtaaatatagaa 120
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 cagggggtttctggaggggaagccaggaaagggaataacatttgaaatgtaaatatagaa 320

                                                                       
Query: 121 aatatccaataaaagaaaagaaaaaaataaagaataccaaataaagtcccccaacacaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatatccaataaaagaaaagaaaaaaataaagaataccaaataaagtcccccaacacaga 380

                                                                       
Query: 181 gtctttggcctgcacaataaggacgtggggagaagcaactataccaagtactctttggct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtctttggcctgcacaataaggacgtggggagaagcaactataccaagtactctttggct 440

                                                                       
Query: 241 aacacagtat----tttttactgagacgttagggaaaaggaagtaaaataatgtcaggag 296
           ||||||||||    |    |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacacagtatcagct----actgagacgttagggaaaaggaagtaaaataatgtcaggag 496

                                                                       
Query: 297 acacaaaatgggaattcacttctgggtcataaaaaaggaaata-atgagttagtctagct 355
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 497 acacaaaatgggaattcacttctgggtcataaaaaaggaaatatatgagttagtctagct 556

                                                                       
Query: 356 tcttataccaaaatccaccaattaattcatccaaaagttcgaaatgaaacagacgtacag 415
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tcttataccaaaatccaccaattaattcatccaaaagttcgaaatgaaacagacgtacag 616

                                                                       
Query: 416 ggcaccgtgcttcttcactatgtagcacaggctagtcttcctatctcagttacacctgtg 475
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ggcaccgtgcttcttcactatgtagcacaggctagtcttcctatctcagttacacctgtg 676

                                                                       
Query: 476 caccactatacctagcttccttagctatccttcctcggtgctacaatgtatacttttctc 535
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 caccactatacctagcttccttagctatccttcctcggtgctacaatgtatacttttctc 736

                                                                       
Query: 536 actctaggcattgagttaaggatcaatgctttctttgggaaagttaagagccacatgatt 595
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 actctaggcattgagttaaggatcaatgctttctttgggaaagttaagagccacatgatt 796

                                                      
Query: 596 actacactgattaaattgttacagatatcaaagacagcgtttc 638
           |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 797 actacactgattaaattgttacagatatcaaagacagcatttc 839


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1039
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1029
Effective search space:   646212
Effective search space used:   646212
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)