Query= MSMg01no497_m23.b1 MSMg01no497_m23.b1 CHROMAT_FILE:
MSMg01no497_m23.b1 PHD_FILE: MSMg01no497_m23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:37 2005
(677 letters)
>mm_chr13_97173461_97174537
Length = 1077
Score = 1255 bits (649), Expect = 0.0
Identities = 667/673 (99%)
Strand = Plus / Plus
Query: 5 gaattctaattcttcgcgggggccatcaaaaactgggtgaagctccttgtcctacctttt 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaattcggggcgggggccatcaaaaactgggtgaagctccttgtcctacctttt 264
Query: 65 ggaagttggctgcatccactccctagatcagggaggaggtccctttgtgagagcgcatcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggaagttggctgcatccactccctagatcagggaggaggtccctttgtgagagcgcatcc 324
Query: 125 ctgcagttaggtatttaagcaggcagatggtttggttcataatttgtgtcttcatggagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctgcagttaggtatttaagcaggcagatggtttggttcataatttgtgtcttcatggagg 384
Query: 185 aactcatttctttgacttataacttgctaatgtcaagaatgaaaacaacctggttttgtc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aactcatttctttgacttataacttgctaatgtcaagaatgaaaacaacctggttttgtc 444
Query: 245 aaaatggaagtaatgaatggatagggaggatgttgacatgggaaaatggatgcaaagctg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaaatggaagtaatgaatggatagggaggatgttgacatgggaaaatggatgcaaagctg 504
Query: 305 taattggaggccgtatttgaggatggctgtgtgaagcaggaagagctgggtaggcgctct 364
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taattggaggccatatttgaggatggctgtgtgaagcaggaagagctgggtaggcgctct 564
Query: 365 cacctgggtgaccacattcactcctgcagtaggtgtgtttccatggcagtacactataca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cacctgggtgaccacattcactcctgcagtaggtgtgtttccatggcagtacactataca 624
Query: 425 ctagctgggctccagtggagcactcttgagacttagctttacataaggaagagcgtttgt 484
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 625 ctagctgggctccagtggagcactcttgagacttagctttacataaggaagagcatttgt 684
Query: 485 tagctttcccatgtggcagctttcacctcctctgaagtccatagtggttgatactgacat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tagctttcccatgtggcagctttcacctcctctgaagtccatagtggttgatactgacat 744
Query: 545 caacagttgatgattctgatgctattacgtgaacagtgaacctccaagatgaccagtatc 604
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 caacagttgatgatactgatgctattacgtgaacagtgaacctccaagatgaccagtatc 804
Query: 605 tgcattttcattagaactccattttagccattagtcttttccttgtttggagggtagttt 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tgcattttcattagaactccattttagccattagtcttttccttgtttggagggtagttt 864
Query: 665 gcgttgctcttaa 677
|||||||||||||
Sbjct: 865 gcgttgctcttaa 877
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space: 711689
Effective search space used: 711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no497_m23.g1 MSMg01no497_m23.g1 CHROMAT_FILE:
MSMg01no497_m23.g1 PHD_FILE: MSMg01no497_m23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:37 2005
(218 letters)
>mm_chr13_97340786_97341408
Length = 623
Score = 369 bits (191), Expect = e-107
Identities = 210/221 (95%), Gaps = 9/221 (4%)
Strand = Plus / Minus
Query: 1 caggggctcaagaaacattatcccccccccagaggaggagctacagggattaatggttgc 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 508 caggggctcaagaaacattat----cccccagaggaggagctacagggattaatggctgc 453
Query: 61 taggagacgggagacacttctttagtgttgcttatgcccctcacccacactcatgcaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 taggagacgggagacacttctttagtgttgcttatgcccctcacccacactcatgcaaac 393
Query: 121 aatccaataaactcagtgaagcacac-----agtcagggaagttgaagtagtttaatggt 175
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 392 aatccaataaactcagtgaagcacacgcggaagtcagggaagttgaagtagtttaatggt 333
Query: 176 tgatggggaaagggatcatggtgtgtgtggaagggggatga 216
||| |||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgacggggaaagggatcatggtgtgtgtggaagggggatga 292
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 218
Length of database: 623
Length adjustment: 9
Effective length of query: 209
Effective length of database: 614
Effective search space: 128326
Effective search space used: 128326
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
