Query= MSMg01no498_d21.b1 MSMg01no498_d21.b1 CHROMAT_FILE:
MSMg01no498_d21.b1 PHD_FILE: MSMg01no498_d21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:11 2005
(420 letters)
>mm_chr13_11768709_11769523
Length = 815
Score = 719 bits (372), Expect = 0.0
Identities = 391/400 (97%), Gaps = 7/400 (1%)
Strand = Plus / Plus
Query: 22 gtgcacctgcttattatcatggacatgtcttacaaacagaaatatataattctttgggca 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 gtgcacctgcttattatcatggacatgtcttacaaacagaaatatataattctttgggca 281
Query: 82 taagtgttacgataagttttaatgcccctttctcagataaacagtctcttctatactaaa 141
||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 282 taaatgttacgataagttttagtgcccctttctcagataaacagtctcttctatactaaa 341
Query: 142 ctgtgctccttatataaataccaagcatcctctggatttagacttcatgaattagaaact 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ctgtgctccttatataaataccaagcatcctctggatttagacttcatgaattagaaact 401
Query: 202 gaatctggactgattatctgaagatcagtcagaggcaatggcagaggtgataaccagaag 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gaatctggactgattatctgaagatcagtcagaggcaatggcagaggtgataaccagaag 461
Query: 262 gtatcttaatgatgacc-gtgttgttgagtgtctttatcgtcctttcctaccttggggtc 320
||||||||||||||||| | |||||||||||||||||||||||| |||||||||||
Sbjct: 462 gtatcttaatgatgacccg-gttgttgagtgtctttatcgtcct-----accttggggtc 515
Query: 321 ccaggaaattcacagaagttatcagtggggcattccatgtaaccacagcttatattcttt 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ccaggaaattcacagaagttatcagtggggcattccatgtaaccacagcttatattcttt 575
Query: 381 agtcagtatcacagccccaaacccactacccctcagtaga 420
||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 agtcagtatcacagccccaaacccactacccctcagtaga 615
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 815
Length adjustment: 9
Effective length of query: 411
Effective length of database: 806
Effective search space: 331266
Effective search space used: 331266
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no498_d21.g1 MSMg01no498_d21.g1 CHROMAT_FILE:
MSMg01no498_d21.g1 PHD_FILE: MSMg01no498_d21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:11 2005
(438 letters)
>mm_chr13_11934546_11935383
Length = 838
Score = 822 bits (425), Expect = 0.0
Identities = 434/437 (99%)
Strand = Plus / Minus
Query: 1 atttcacacctgtaggttttctaaggcatattttctacttttagaacttttgactggctc 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 572 atttcacacctgtaggttttctaaggcatattttctacttttagaactttcgactggctc 513
Query: 61 tcacagatgcctttacatgtcagttttaatcataaggtaggccctgccaggtatatatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tcacagatgcctttacatgtcagttttaatcataaggtaggccctgccaggtatatatat 453
Query: 121 gtattgtaagccagtgtaattttcttgtagcttaaaatgccaccgacgtgttccttagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gtattgtaagccagtgtaattttcttgtagcttaaaatgccaccgacgtgttccttagta 393
Query: 181 gctgaactccctccctcgtgcaccatgaatagaagtcttttgccactgaggtgatggaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gctgaactccctccctcgtgcaccatgaatagaagtcttttgccactgaggtgatggaat 333
Query: 241 gacagcctcatatgagactagcaatgccattaaaagcactgtggaaatgagggcaaaaat 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gacagcctcaaatgagactagcaatgccattaaaagcactgtggaaatgagggcaaaaat 273
Query: 301 cgacggaaacttttctaggctgagattctttgtgtagtattttatttaagatttttatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 cgacggaaacttttctaggctgagattctttgtgtagtattttatttaagatttttatat 213
Query: 361 tttgttctgagttctctccctctctccttccctcccttgcccctctccctcaccttccct 420
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 212 tttgttctgagttctctccctctctccttccctcccctgcccctctccctcaccttccct 153
Query: 421 cagacttgctctgtagc 437
|||||||||||||||||
Sbjct: 152 cagacttgctctgtagc 136
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space: 355641
Effective search space used: 355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
