TGCCCGTNNNNATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXCGCGGAATTCTATACTAGAAATATTGCTTTAGTTCTGGATTT
CGTTCATAACCTCGTATAACACAAGCAAGCCACAAGCACAGTACTTAACA
AGAATAAGCACAGCAAACTGCACCAAACCTATCTTCTTTCATAATAAAGC
ATCATCAGGCCCTTTCTAGGATTAACTTTAAAGGTTCCTTAGTTGACACA
TATACATCTTTTTGGTCTTTCCCTTTGGATGGTGGAGCCTCTTTGATTGG
CCCTTTGACTTGAGTATAGTAAGCCTATCTATCCTCTTTCAGCTGTCTAT
AGAGTTGTTTCAAATGGTCAGAACCATTTCATGGGGTCTCTCTTAAAAGG
GCCGCAGTTTCCTTTTTTCTTTTTTCATCTTTTTAAAAAATTAGATATTT
TCTTTATTTACATTTCAAATGTTATCCACTTTCCTAGTTTCCCCTCTGAA
AACACCCTATCCCTTCCCCCCTCCCCATGCTCACCAACCCACACACTCTC
ATTTCCTGGCCCTGGCAATTTCCTATACTGGGGCATAGAGCCTTCACAGG
ACCAAGGGTCTCTCCTCCCATTGATTACTGATAGGCTATCCTCTGTTACA
TATGCAGCTAGAACCATGAGTCCCACCTTATGTCTTCTTTGGTTGGTGGA
TTAGTCCCAGGGAGCTCTGGAGATACTGGTTA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXACAACAGAGGAATCTTTAATGGCTAAGAAGCACTTAAAGAA
ATGTTCAAAGTCCTTAGTGATCAGGGAAGTGCAATTTAAAACTACCCTGA
GATTCCACCTTACACCAATCAGAATGACTAAGATAAAAAAATCAGGTGAC
AGCACATGTTGGCAAGGATGTGGAGAAAGAGGAGCACTCCTCCATTGCTG
GTGGGATTGCAAACTGGTACAACCACTCTGGAAATCAATCTGGAGGTTCC
TCAGAAAGTTGGAAATAGATTTAGCTGAAGACCCAGCTATACTACTCTTG
GGCATATACCCAAAAGATGCCCCACCATGCCAAAGGGGCATGTGTTCCAC
TATGTTCATAGCAGCCTCATTTGTGATTGCCAGAAGCTGGAAACAACCCA
GATGCCCCACACTAGAATAATGGATACAGAACATGTGGTTCATTTACACA
ATAGAATGCTACTCCGCTATTAAGAAGAAGGACATCATGCGTTTTGCAAT
CAAATGGATGAAACTAGAAAATATTCTCCTAAGTGAGGGAACTCAGACAC
CAAAAGAAATGCATAGTAGATATTAACCAAAAATGTACAAATTACCCAGT
ACACAACCCACAGAACTCAGGAAGGTTAACAAGCTGAAGGACCCAAGTAA
GGATGCCTCAATCCCACTTATGAAGGAGAAG

Query= MSMg01no498_l01.b1 MSMg01no498_l01.b1 CHROMAT_FILE:
MSMg01no498_l01.b1 PHD_FILE: MSMg01no498_l01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:50 2005
         (674 letters)



>mm_chr13_15218000_15219069
          Length = 1070

 Score = 1052 bits (544), Expect = 0.0
 Identities = 556/562 (98%), Gaps = 4/562 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctatactagaaatattgctttagttctggatttcgttcataacctcgtataacac 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 558 gaattctatactagaaatattgctttagttctggatttcgttcataacctcttataacac 499

                                                                       
Query: 65  aagcaagccacaagcacagtacttaacaagaataagcacagcaaactgcaccaaacctat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 aagcaagccacaagcacagtacttaacaagaataagcacagcaaactgcaccaaacctat 439

                                                                       
Query: 125 cttctttcataataaagcatcatcaggccctttctaggattaactttaaaggttccttag 184
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 cttcttccataataaagcatcatcaggccctttctaggattaactttaaaggttccttag 379

                                                                       
Query: 185 ttgacacatatacatctttttggtctttccctttggatggtggagcctctttgattggcc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ttgacacatatacatctttttggtctttccctttggatggtggagcctctttgattggcc 319

                                                                       
Query: 245 ctttgacttgagtatagtaagcctatctatcctctttcagctgtctatagagttgtttca 304
           ||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||
Sbjct: 318 ctttgacttgagtatagtaagc----ctatcctctttcagctgtctatagagttgtttca 263

                                                                       
Query: 305 aatggtcagaaccatttcatggggtctctcttaaaagggccgcagtttccttttttcttt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aatggtcagaaccatttcatggggtctctcttaaaagggccgcagtttccttttttcttt 203

                                                                       
Query: 365 tttcatctttttaaaaaattagatattttctttatttacatttcaaatgttatccacttt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tttcatctttttaaaaaattagatattttctttatttacatttcaaatgttatccacttt 143

                                                                       
Query: 425 cctagtttcccctctgaaaacaccctatcccttcccccctccccatgctcaccaacccac 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 cctagtttcccctctgaaaacaccctatcccttcccccctccccatgctcaccaacccac 83

                                                                       
Query: 485 acactctcatttcctggccctggcaatttcctatactggggcatagagccttcacaggac 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82  acactctcatttcctggccctggcaatttcctatactggggcatagagccttcacaggac 23

                                 
Query: 545 caagggtctctcctcccattga 566
           ||||||||||||||||||||||
Sbjct: 22  caagggtctctcctcccattga 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1070
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1060
Effective search space:   703840
Effective search space used:   703840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)