XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTCT
ATTTTCTGCAACCTTCGGAGAGGTGTGAAATGGTGTATTGCAGTGTCTGG
TATGTTAGCTTATTCTGAGTATTAAATTGTATTTGTTTAGCATTCCATAA
CCCATTGCGATGTTTGGGGGACATGTATCCCGCTCTCTCCACCCAGGAAA
ATGTTTAGTTGTTTAATATATGGATAATGTACTGTTGGAAATGATTTTAG
CTAACCTTATAAGTAACAGTTGAAAAACTCTTGAAACATAATGAACAGGA
AGCACTCTGCTGTTAATGGCTATTTATACAAGCAGAGCCGTTTCCTTTAA
CTCTACAAATGCATACTCTGTCTAATACTGTTTTTTTTTCAATATTAACA
CTCAACTTTATTTCCTTTATTATCTACATAGTGACTCTGATTAAATGTCA
GGCTTATGGAGTTTGAAGAAAATGAGGAAGAGAAGGAAAANCTTTTTCCT
TGGGGGGGGGGGGTTGTGGNNTTTTTTTTTTTCNCGGGGGGGGTGGGGGG
GGCCGCCCCCCACCCCCCCCCCCTCNNNNTTTGTCCTNNTTTTTTTGTTT
TTTCGTGTCTTTTTTTTCGCGTTGTTTCTTTGGCGGTTTGTGTCTCTCTG
TCCCCCTTCCTTTTTTGCTGTGTTTTGTGTTGGTTTTTTTTTTTTCTCTT
TTCCTGTCTCTT

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTGGAAAGCCTTTAATGTCTTTCTTATTTCTGTTT
TGACCAATTTTTCATTGAGTAACATGTTGTTAAGTTTCCATGAGTTTGTA
AGCTTTCTCTTGTTTCTGTTGATGTTGATGTCCAGTTTTTATCCATAGTG
GTCTGATTGAATTTAGGGGGTTATTTTTATTTTCTCATGTCTATTGAGAG
TTGTTTTGTAAACAAGAATATGATCAGTTTTGGTGGAAGTTCTGTGAAGT
GCTGAGAAGAAAGTATATCTTCTGTGTTTGGTGGAATGTCCTGGAAAGAT
TTGTTAGGTTCATTTACTTTATAAATTCAATTAGCTTCATAAGTTCTCTT
TTATGTTTTTGTCTAAATGATCTGTCCATTGGAAAGAGTAGTTTTAGGGT
TAATGCATGATTTAAGTTGTAGTCATTTATTTTTTTAATGGAAAGATGGG
TTCCATTTGGTTTGGAACATAGATGTTAAGAATTGGAATGCCATATTAGT
ACATTTTTTCTTTGATGAAAATATAGTGATATTCCCCATACCTTTTCATT
ATTTTTAGTTTGAAGTCTGTTTTGTTAAATATTAAAATGACTATTCCTGT
TTGCTTCCTAACCTCCTTTGCTTGGAAACCTATACAACCCTTTAATATAA
TAATGTAATTTAAC

Query= MSMg01no501_c03.b1 MSMg01no501_c03.b1 CHROMAT_FILE:
MSMg01no501_c03.b1 PHD_FILE: MSMg01no501_c03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:27:55 2005
         (449 letters)



>mm_chr13_5232874_5233723
          Length = 850

 Score =  808 bits (418), Expect = 0.0
 Identities = 439/446 (98%), Gaps = 1/446 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctttct-attttctgcaaccttcggagaggtgtgaaatggtgtattgcagtgtct 63
           ||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 gaattctttctaattaaatgcaaccttcggagaggtgtgaaatggtgtattgcagtgtct 591

                                                                       
Query: 64  ggtatgttagcttattctgagtattaaattgtatttgtttagcattccataacccattgc 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 ggtatgttagcttattctgagtattaaattgtatttgtttagcattccataacccattgc 531

                                                                       
Query: 124 gatgtttgggggacatgtatcccgctctctccacccaggaaaatgtttagttgtttaata 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gatgtttgggggacatgtatcccgctctctccacccaggaaaatgtttagttgtttaata 471

                                                                       
Query: 184 tatggataatgtactgttggaaatgattttagctaaccttataagtaacagttgaaaaac 243
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tatggataatgtacttttggaaatgattttagctaaccttataagtaacagttgaaaaac 411

                                                                       
Query: 244 tcttgaaacataatgaacaggaagcactctgctgttaatggctatttatacaagcagagc 303
           ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 410 tcttggaacataatgaacaggaagcactctgctgctaatggctatttatacaagcagagc 351

                                                                       
Query: 304 cgtttcctttaactctacaaatgcatactctgtctaatactgtttttttttcaatattaa 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 cgtttcctttaactctacaaatgcatactctgtctaatactgtttttttttcaatattaa 291

                                                                       
Query: 364 cactcaactttatttcctttattatctacatagtgactctgattaaatgtcaggcttatg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 cactcaactttatttcctttattatctacatagtgactctgattaaatgtcaggcttatg 231

                                     
Query: 424 gagtttgaagaaaatgaggaagagaa 449
           ||||||||||||||||||||||||||
Sbjct: 230 gagtttgaagaaaatgaggaagagaa 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 850
Length adjustment: 10
Effective length of query: 439
Effective length of database: 840
Effective search space:   368760
Effective search space used:   368760
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)