Query= MSMg01no502_m12.b1 MSMg01no502_m12.b1 CHROMAT_FILE:
MSMg01no502_m12.b1 PHD_FILE: MSMg01no502_m12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:54 2005
(637 letters)
>mm_chr13_98382091_98383127
Length = 1037
Score = 1207 bits (624), Expect = 0.0
Identities = 637/646 (98%), Gaps = 9/646 (1%)
Strand = Plus / Plus
Query: 1 ccctctcttctggaacagggatatgctcaccagaattacaacagctgttctcagatcagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ccctctcttctggaacagggatatgctcaccagaattacaacagctgttctcagatcagg 251
Query: 61 aaatgacgctgagggctggagagatggtccagcaggtaagagcactgacttctcttccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aaatgacgctgagggctggagagatggtccagcaggtaagagcactgacttctcttccaa 311
Query: 121 aggtcctgagttcaaatcccagaaaccacatggtggctcacaaccatctgtaatgagatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aggtcctgagttcaaatcccagaaaccacatggtggctcacaaccatctgtaatgagatc 371
Query: 181 tgactctctcttctggtgtatctgaagacagctacagtgtacttagatataataataata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tgactctctcttctggtgtatctgaagacagctacagtgtacttagatataataataata 431
Query: 241 ataataataat-------at--taataataataaatcaatcttttaaaaaaaggaaatga 291
||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ataataataataataataataataataataataaatcaatcttttaaaaaaaggaaatga 491
Query: 292 ctctgagttaagagcctccatataaggtagaggtgagaaaattaggaggaaccccagggc 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ctctgagttaagagcctccatataaggtagaggtgagaaaattaggaggaaccccagggc 551
Query: 352 ctagatggtggcatgtgaatatctgtcctccctgaatgatggacctcagatcgtcatgct 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ctagatggtggcatgtgaatatctgtcctccctgaatgatggacctcagatcgtcatgct 611
Query: 412 acgtaagagaaaataactattatttatgtgattgctatttcagccaaaagatgttttcta 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 acgtaagagaaaataactattatttatgtgattgctatttcagccaaaagatgttttcta 671
Query: 472 actaataggatatgtgagggaagttgccaaaattgagatgcattcaaataaactcattta 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 actaataggatatgtgagggaagttgccaaaattgagatgcattcaaataaactcattta 731
Query: 532 atgtgtttaaaaattaatgatttcttgtcctttgaagcttccatctagtctcttacggtt 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 atgtgtttaaaaattaatgatttcttgtcctttgaagcttccatctagtctcttacggtt 791
Query: 592 gactgcactgaatataacaacacgatctgtgtgtaagtctgtgttc 637
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 gactgcactgaatataacaacacgatctgtgtgtaagtctgtgttc 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_m12.g1 MSMg01no502_m12.g1 CHROMAT_FILE:
MSMg01no502_m12.g1 PHD_FILE: MSMg01no502_m12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:54 2005
(321 letters)
>mm_chr13_98460099_98460819
Length = 721
Score = 621 bits (321), Expect = 0.0
Identities = 321/321 (100%)
Strand = Plus / Minus
Query: 1 gttctctatatgtggaagaaagccccacacagtgaatgctccaaaattgcaccctgaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gttctctatatgtggaagaaagccccacacagtgaatgctccaaaattgcaccctgaaaa 462
Query: 61 aaagctgtggagaaggcaggacgtgtgaacatgacatttagtgaagaatcagaagactca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 aaagctgtggagaaggcaggacgtgtgaacatgacatttagtgaagaatcagaagactca 402
Query: 121 cagaggctcaataaatctaagaccctgagatcatttacctaggaattttcccaacacagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 cagaggctcaataaatctaagaccctgagatcatttacctaggaattttcccaacacagc 342
Query: 181 tcaaaactcaacaagctctgatgtcatcgtgtattcttattggagtagaattatccatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tcaaaactcaacaagctctgatgtcatcgtgtattcttattggagtagaattatccatgc 282
Query: 241 tcacaacaatggctgagttacagtgaaggttgaaatggttcagtctttggagtgaaggca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tcacaacaatggctgagttacagtgaaggttgaaatggttcagtctttggagtgaaggca 222
Query: 301 gcaagaaatatgaaccatacc 321
|||||||||||||||||||||
Sbjct: 221 gcaagaaatatgaaccatacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
