Query= MSMg01no503_h01.b1 MSMg01no503_h01.b1 CHROMAT_FILE:
MSMg01no503_h01.b1 PHD_FILE: MSMg01no503_h01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:43 2005
(618 letters)
>mm_chr13_34003089_34004106
Length = 1018
Score = 596 bits (308), Expect = e-174
Identities = 329/336 (97%)
Strand = Plus / Plus
Query: 282 gagcaaaagaatcaagtggtcctgaaaagcctcaaaagcatgtggtctatgagatgtggt 341
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 482 gagcaaaagaatcaagtggtcctgaaaagcctcaaaaacatgtggtctatgagatatggt 541
Query: 342 ctatgaaagagcctcagaagatagaaattaggcccacatgactgagtcatcatctcttct 401
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 542 ctatgaaagagcctcagaagataggaattaggcccacatgactgagtcatcatctcttct 601
Query: 402 ttttaaatttaaatatatgtgtatggatgttttgcctgtatgtatgcctatgcaccacat 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 602 ttttaaatttaaatatatgtgtatggatgttttgcctgtatgtatgcctatgcactacat 661
Query: 462 atatgtatgcctatgcaccatatgtatgtactcctgtgcaccacatgtatgtatgcctgg 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 atatgtatgcctatgcaccatatgtatgtactcctgtgcaccacatgtatgtatgcctgg 721
Query: 522 gttttacatgtacatatgccatgtgcacatgtatacatgcacatgctgcctggtgtctgc 581
||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||
Sbjct: 722 gttttacatgtacatatgccatgtgcatatgtgtacgtgcacatgctgcctggtgtctgc 781
Query: 582 agaggtcaaagaaggcattgggttccctgggtcctc 617
||||||||||||||||||||||||||||||||||||
Sbjct: 782 agaggtcaaagaaggcattgggttccctgggtcctc 817
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space: 612864
Effective search space used: 612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no503_h01.g1 MSMg01no503_h01.g1 CHROMAT_FILE:
MSMg01no503_h01.g1 PHD_FILE: MSMg01no503_h01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:43 2005
(373 letters)
>mm_chr13_34135827_34136599
Length = 773
Score = 688 bits (356), Expect = 0.0
Identities = 367/372 (98%), Gaps = 3/372 (0%)
Strand = Plus / Minus
Query: 1 ccggaggaagacttatttaccatgccaaactggtatatttaatatttactatgacagggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ccggaggaagacttatttaccatgccaaactggtatatttaatatttactatgacagggt 388
Query: 61 atcatgcgtgagttagcatcagtacccactcgagcacacatcactgctttggtttgtgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 atcatgcgtgagttagcatcagtacccactcgagcacacatcactgctttggtttgtgcc 328
Query: 121 tcagttttcccatccaggttgtgtcttcataacagactgcaaatctgaacagggacttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tcagttttcccatccaggttgtgtcttcataacagactgcaaatctgaacagggacttcc 268
Query: 181 tgttttgacccactctggcacccaggagcttgacctctgacctagttagatattttttct 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 267 tgttttgacccactctggcacccgggagcttgacctctgacctagttagatattttttct 208
Query: 241 tcttctggtcaacttgacacaaacctgggtcctcttagaaaaaaggaacttcgattgcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 tcttctggtcaacttgacacaaacctgggtcctcttagaaaaaaggaacttcgattgcca 148
Query: 301 aaatgcctccattagattggctaaggggctagtagtctatgggacatttttaaacagtta 360
|||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 147 aaatgcctccgttagattggctaaggggctagt---ctatgggacatttttaaacagtta 91
Query: 361 tgactgatgtgg 372
||||||||||||
Sbjct: 90 tgactgatgtgg 79
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
