Query= MSMg01no506_f17.b1 MSMg01no506_f17.b1 CHROMAT_FILE:
MSMg01no506_f17.b1 PHD_FILE: MSMg01no506_f17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:31 2005
(702 letters)
>mm_chr13_53346021_53347122
Length = 1102
Score = 650 bits (336), Expect = 0.0
Identities = 351/356 (98%), Gaps = 1/356 (0%)
Strand = Plus / Minus
Query: 5 gaattcttttattattctcttactcgagacctaaggaaagtcagaagtgctcaaattgga 64
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gaattcttttattactatcttactcgagacctaaggaaagtcagaagtgctcaaattgga 296
Query: 65 ggctatgggaaatgtaaatgagacacactgtcttttctctcagagagttagagtaacgac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ggctatgggaaatgtaaatgagacacactgtcttttctctcagagagttagagtaacgac 236
Query: 125 agctccatctttaaagaaatatctagcttgctttctgttgctgtgagaaaccgcaggact 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 agctccatctttaaagaaatatctagcttgctttctgttgctgtgagaaaccgcaggact 176
Query: 185 caaaccaacttagggattagaaaggtttacgtcatctttcaggttacagtcgatcgggta 244
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 175 caaaccaacttagggattagaaaggtttacgtcatctttcaggtt-cagtcgatcgggta 117
Query: 245 aagccagggcaggagctcagggccgaaacctggatgctgaaactgaaggcaaggcctctg 304
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 116 aagccagggcaggagctcagggccgaaacctggaggcagaaactgaaggcaaggcctctg 57
Query: 305 tacagtggttggtgctcactggcttgttcctctcattttctcatacagcccaggcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 tacagtggttggtgctcactggcttgttcctctcattttctcatacagcccaggcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 702
Length of database: 1102
Length adjustment: 10
Effective length of query: 692
Effective length of database: 1092
Effective search space: 755664
Effective search space used: 755664
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no506_f17.g1 MSMg01no506_f17.g1 CHROMAT_FILE:
MSMg01no506_f17.g1 PHD_FILE: MSMg01no506_f17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:32 2005
(526 letters)
>mm_chr13_53189336_53190256
Length = 921
Score = 978 bits (506), Expect = 0.0
Identities = 519/526 (98%), Gaps = 5/526 (0%)
Strand = Plus / Plus
Query: 1 catggggtgatggtgaggattgagtgcagttggtagattggtcgtctagtgtgcaccaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catggggtgatggtgaggattgagtgcagttggtagattggtcgtctagtgtgcaccaag 260
Query: 61 ccctggctctgatgcccagcgctgcatgaataggacatgctggtgcacacctatagtgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccctggctctgatgcccagcgctgcatgaataggacatgctggtgcacacctatagtgcc 320
Query: 121 atcacttgggacgtagaggcaggtggctcagagattgaaggtcatctttggctacagagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcacttgggacgtagaggcaggtggctcagagattgaaggtcatctttggctacagagc 380
Query: 181 gagttcaaagccagcctggaacataggagatcctgcctccaaaaacaatttttaagttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagttcaaagccagcctggaacataggagatcctgcctccaaaaacaatttttaagttat 440
Query: 241 aaaaaggtatattggtaaataattaaactatgacatgtaagtctctacctgctcctggaa 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaaaggtaaattggtaaataattaaactatgacatgtaagtctctacctgctcctggaa 500
Query: 301 ataaaaaacaaaaacaaaaccacccacgcctcctactcaagtctaatgaggccaggaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ataaaaaacaaaaacaaaaccacccacgcctcctactcaagtctaatgaggccaggaaga 560
Query: 361 tcctgtgtaacagaaactgaagggaattcggtccacatagcccaagggttacatcagaaa 420
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 561 tcctgtgtaacagaaactgaa-----ttcggtccacatagcccaagggttacatcagaaa 615
Query: 421 gcacatcttaaattttaatccatcaacatcaattcagtaaatgctttctacatatggact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 gcacatcttaaattttaatccatcaacatcaattcagtaaatgctttctacatatggact 675
Query: 481 ggtaaaaggctctcccttcagcgtgctaaaggggtaggtgtgtaga 526
||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 676 ggtaaaaagctctcccttcagcgtgctaaaggggtaggtgtgtaga 721
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 921
Length adjustment: 10
Effective length of query: 516
Effective length of database: 911
Effective search space: 470076
Effective search space used: 470076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
