NNAAACCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGGATCC
GCGGAATTCCAGTGTAGTTGCCTAAATTTCCAATGGAGGAGAGTTCAACT
TTCTCCACATCCTTACCAGCATATGTTGTTCCTTGAGCTTTTGATCTTAG
ACATTCTGATTGATATCAGGTGGAAACTCAGGGTGGTATTTATTTTCATT
TCCCTGATGAGTAAGATGATCGAGTTTCTCCTTAAGTCCTTCTTAACAAT
TGCAGATTCCTATGTTGAGAATTCTCTGCTTAGCTCTGTACTCCATTTTA
AAATTGGGTTATTTGGTTTTCTGGAGTCTATACACACACACACACACACA
CACACACACACAAACACACACACACACACACACACATATATATATATATA
TATATCACACATATATGTGTGTATCTATGTATATATAACTTGGATACTGG
CCCTCTGTCAGATGTATGGTTAGTGAAGATTTTTTCCCTAGTCTGTGGGC
TGTATTTTGTACTGTTGAGAGTGTCCCTTGCCTTACAGAAGCTTCTCATG
AAATGGCATTTATCAGTTGTTGACATTAGGGCCTGAGACATTAGTGTTCT
GATCAGGAAATTTGTCTTCTGTATCAATGCATTAAAAGCTATGTCCCAAA
TTCTGTTCTATTAGCTAAAATATTAGGTTTTATTTTAAGGTCCTTGATCC
ATTTGGGCTTGAGTTTTATGGAAGATGCTAAATATGAATCTTTTTGCATT
CTTCTATGTGGA

NNNNCCAATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGGTTTCTGGAGAAG
CTGAGTGTTCTCGCCTGGTTTATGAAGCAGCTCTATATTTATGCTACTAT
TATGCTCACAGGGTGAGACCCCCTGACAGGCTGTTTCTGTTTTACTTTCG
TTTTCCCTGGAACGGCTTTCGGTGTTGTCCTTGTGTGTTCTGTTCGGGAT
TGTTGTCATTCTGTACCAGTTTGGGGGCTATCATCTTGATTTGTAAAATG
GCACTGGCACAGAGCACCCTTCTGAGTCTGGTTCTGGGCCACTTTAGGCA
CTTCTGCCAGGTCGCATAGGACTCAGGGCTGATTATTCCTTCAAGCAAAG
CTTCTGTAGTAGTGAATGGCCTGCTTTTATGGTTGACTTGCACAAGGAAG
GGACCTTCCATCTCCCCATCATTTACTGGGTAAACGCTATAGTCTATGAA
GTCCCAGGTCACCTGGACCAGGTGCCTTATATCACTACTTGGCAGTATTT
AGTGGAAAAATCCCTGTTTGGATGAAACCCTGTTTTGTCACCTGCTGTCT
CACCCCCTGCTCTCCTTCCCCTGAAGGAGAGCAGTCAGCCTTACTTCCTT
CTTCAGCTCTCAACTTNGATCTTTGCCCCCTCCTTATTGTTGCTGCCTAA
GCCTCTGTCCAGCANGTACAGTCAAAAGAAGAAGAAGCTCCTGACTTCAC
CTGGAGTCTGCCCCATAATCAGGCTC

Query= MSMg01no507_k19.g1 MSMg01no507_k19.g1 CHROMAT_FILE:
MSMg01no507_k19.g1 PHD_FILE: MSMg01no507_k19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:18 2005
         (543 letters)



>mm_chr13_80406834_80407776
          Length = 943

 Score =  783 bits (405), Expect = 0.0
 Identities = 423/429 (98%)
 Strand = Plus / Minus

                                                                       
Query: 115 ctttcgttttccctggaacggctttcggtgttgtccttgtgtgttctgttcgggattgtt 174
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ctttcgttttccctggaacggctttcggtgttgtccttgtgtgttctgttcgggattgtt 684

                                                                       
Query: 175 gtcattctgtaccagtttgggggctatcatcttgatttgtaaaatggcactggcacagag 234
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| 
Sbjct: 683 gtcattctgtaccagtttgggggctatcatcttgatttgtaaaatggcactagcacagat 624

                                                                       
Query: 235 cacccttctgagtctggttctgggccactttaggcacttctgccaggtcgcataggactc 294
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 cacccttctgagtctggttctgggccactttaggcacttctgccaggtcgcataggactc 564

                                                                       
Query: 295 agggctgattattccttcaagcaaagcttctgtagtagtgaatggcctgcttttatggtt 354
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 563 agggctgattattccttcaagcaaagcttctgtagtagtgcatggcctgcttttatggtt 504

                                                                       
Query: 355 gacttgcacaaggaagggaccttccatctccccatcatttactgggtaaacgctatagtc 414
           | |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 503 gccttgcacaaggaagggaccttccatctccccatcatttactgagtaaaagctatagtc 444

                                                                       
Query: 415 tatgaagtcccaggtcacctggaccaggtgccttatatcactacttggcagtatttagtg 474
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tatgaagtcccaggtcacctggaccaggtgccttatatcactacttggcagtatttagtg 384

                                                                       
Query: 475 gaaaaatccctgtttggatgaaaccctgttttgtcacctgctgtctcaccccctgctctc 534
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gaaaaatccctgtttggatgaaaccctgttttgtcacctgctgtctcaccccctgctctc 324

                    
Query: 535 cttcccctg 543
           |||||||||
Sbjct: 323 cttcccctg 315


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 943
Length adjustment: 10
Effective length of query: 533
Effective length of database: 933
Effective search space:   497289
Effective search space used:   497289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)