TCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTTTATTTCCACTGCATGTTGCACAGAAAGGGGGCGGGGGGATGACAC
ACAGATGCAAAGAGGGATGCATTTGAGTCCTCCACAGGGCCAATATGTCT
TCGCTTCCCAAGTTTTTAGTAAATGGCTACAAGCTGTGCTCGCCTCTTCA
ACGCTTCTATCAACCGCAGGACCTGGGCCTGGAACAGCCTTCAGCTCCAG
CTCCAGCTCCAGCTTCCCTGGTAGGTCAGCCAAGTTCCAGTTCACAGACT
CTGCAGACAGTGCTGCTATGTGTAAAATGGATGTGGGTACCCATGTCAGA
AGACCCCCCTAAAATGATTGAGCAAGCAAGCAGGGTGTCACTCATGTGGC
AAGTGAACCATCAGCCTTTGATATTGCTGTCCCTGTTATCAGCTTAAACA
TGCAAGAGGGCATCTGGGCATACTGATTTGTTGTCAGATTCTATTCTAGT
TACTGGAGATGCACAGTTGGAGAATAAACAGGATTGTGGGGAGCAGAGGA
GACCCCAAGTGAATGCATATTATTGACAGGAGTATGGTTAAGTCAAGACC
CCCCAATGCCTCAGACTCCTGGGAATGGCAAAGTCTTCCAGGTGTGGGGC
TCAGAAGGATGACATAGCCTTTCTCAGATTCAAATGTAAGTGTTTACAAA
GGACTGACCAGTATGTGCAAAAACTGGCAACTAAAGGTTTCTCTTCCATG
AT

CTCTATTTATCTGGGGTATAACGGTAGGTGGGTGGTTCCCTATCAAGGTG
ATGGGCGTAAATAGGTATTCTCAAAAAGAAAGCGGGAGGAGTATCCGCGG
CATAATGCTGTTCCCGCGATTATCGCCCATCCCACCCACGGCGATTACCT
CCTAGACAGTAGAACCAAGGTTTATGACGCCATTACCACATACGCCCGCA
AAGACGATACCCTGCTACCCCCAGACATCCTACACAATAGTAAGGTCGCG
TAGACGAGCGCCTTACCATAATCACGAACTTAACGCATCGCGTTGTGCTG
TCCATATCTGACTTGATTATATATATACTTATACCACCCACATACGTGCG
CATTAGCCCCCTTTACCCAGCGTGCACGCCAAGCAAAATAACCAATAAAA
TACAACTAGCGAATAATTGCGCCAAATATACTTACCAACAACTAAATATG
AACTTAAAACCATATCATCCCATTCCACCCCTACCCCATATTTACTGATG
TAAATAGACGAAGTATATAATCCCGTTGCGGGTTCGTCCCAACGTTTTGT
GCGCACACTATTATGTATAATATCGTCCCGCCTCCACGCACGTATTCTTG
CCCAAATAAATTTTATCACGATGGTCGTCCCACGCCCCTCTGCTCGTGTC
GCGTTTGTAGGGACGCACCCACACGAAATACAGGGTATAGGATTTTTGTT
TAATCATGCGCCACCCACCACGCGCTACTAATTTTTGTCGCGCGTCCGCG
TTTAATGATAACATACGACGTTAACTCGCCGCCGCACCCGCTATATGTAT
AACCCCCCATTATGTGTTTTATATTTTTGGATCTTCAAGTAACCAACTAA
CCACCGCTGTTAAAGAGAGATTGGTACTCGCCGATATATTACCCGCCGCC
CGCCTATTTCGCCATTAATTACCGATTCGTTATCTATCCACATGATTTAT
GACCCTACCTATCTGTGAAATTTATATTAGACAGACAAGCCCATTAAATA
TATTATTTTAA

Query= MSMg01no509_h14.b1 MSMg01no509_h14.b1 CHROMAT_FILE:
MSMg01no509_h14.b1 PHD_FILE: MSMg01no509_h14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:43 2005
         (572 letters)



>mm_chr13_48227344_48228315
          Length = 972

 Score = 1075 bits (556), Expect = 0.0
 Identities = 568/572 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagctgtgctcgcctcttcaacgcttctatcaaccgcaggacctgggcctggaacagcct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagctgtgctcgcctcttcaacgcttctatcaaccgcaggacctgggcctggaacagcct 260

                                                                       
Query: 61  tcagctccagctccagctccagcttccctggtaggtcagccaagttccagttcacagact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcagctccagctccagctccagcttccctggtaggtcagccaagttccagttcacagact 320

                                                                       
Query: 121 ctgcagacagtgctgctatgtgtaaaatggatgtgggtacccatgtcagaagacccccct 180
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgcagacagtgctgccatgtgtaaaatggatgtgggtacccatgtcagaagacccccct 380

                                                                       
Query: 181 aaaatgattgagcaagcaagcagggtgtcactcatgtggcaagtgaaccatcagcctttg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 aaaatgattgagcaagcaagcagggtgtcactcatgtggcaagtgaaccataagcctttg 440

                                                                       
Query: 241 atattgctgtccctgttatcagcttaaacatgcaagagggcatctgggcatactgatttg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atattgctgtccctgttatcagcttaaacatgcaagagggcatctgggcatactgatttg 500

                                                                       
Query: 301 ttgtcagattctattctagttactggagatgcacagttggagaataaacaggattgtggg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgtcagattctattctagttactggagatgcacagttggagaataaacaggattgtggg 560

                                                                       
Query: 361 gagcagaggagaccccaagtgaatgcatattattgacaggagtatggttaagtcaagacc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gagcagaggagaccccaagtgaatgcatattattgacaggagtatggttaagtcaagacc 620

                                                                       
Query: 421 ccccaatgcctcagactcctgggaatggcaaagtcttccaggtgtggggctcagaaggat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccccaatgcctcagactcctgggaatggcaaagtcttccaggtgtggggctcagaaggat 680

                                                                       
Query: 481 gacatagcctttctcagattcaaatgtaagtgtttacaaaggactgaccagtatgtgcaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gacatagcctttctcagattcaaatgtaagtgtttacaaaggactgaccagtatgtgcaa 740

                                           
Query: 541 aaactggcaactaaaggtttctcttccatgat 572
           ||||| ||||||| ||||||||||||||||||
Sbjct: 741 aaactagcaactagaggtttctcttccatgat 772


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space:   540644
Effective search space used:   540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)