TATAAXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATCCGCGGAA
TTCTTTGCTTTTTCCCGAAGGTCTTTGAACATCCCAGAGGAATGTGAGTG
ACACTTCTCACTAATCTAGCAGCAGCAGGACAGGGAGCTCTGTCCTACTT
GAGAGGGGCTCTTCTCCTTTCTGTAAGACAGTTTATAGGTGACTCTTCAG
AGCATTGATGCCTATCGTTTATTCACTGTTTCTTACATAAGGGTACCCCC
TGCTGATGTAAACTTAAGGCTGTTCTGTCTCAGCCTCCCAGCTTCCAAGA
TTACAAACGTGAGCCATCATTTCTGGCACCAATTCTAAAATACTGATGAA
TCGGTAAAACTGGCTCATATTTTTAAAAGTGGAAGCTTTAAAGTATCTCA
GTCCTATCACCCAGAAATCGCCAGGATAATTAGATGACCACAGCTGCAGA
TGGTATTCTCCAAGATCCTGGAGATAGTACTTGGAGCCACCAACAGAAAA
ACTCACTAGAATCATCTTCATGAAAACTCTAGTAAATTATTTATTTTGCT
TCAGTAAGAAACGTGCAGTTTCAAATAGAAACCCGGGCTCCTGAGAGCGA
GTGCTGTGGCTGAGAATGTAAACTGACAAAGCCCGAGTGCAGAAGGTCGT
GCTAACAAGGCACCAACCGGTTTGCTCTCAGTTTATGGGCTGAGAAGTCC
GCCCTTCTGCATCTTCCCTCCTGA

ATTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCTGTACTTCCCATGGATGGACCAGAGTA
AAGGATGGGACTCAGGCTGGAAGACCATGCAATGGTCACCTGTGCCACTT
CAGCTGCTCCTGGGTAAGGGCTGAAGAAAGGAAATGGTCTTAGAGGGGTT
CTGTCATAGAGACAGCACAGAGACAGGAGACAAGCAGAGGATGTAGGATC
AACATCAGGAAGGAGTTGTGACAGTAACCATCCGTTGTGTAAAAGCGTTG
AGGGACCAGCATAAGGTTTGTGGAAAGGCCACTGGATCTGGGGGTTGGTG
TGATATAGCGCACTAGGGAAGGGTGTGGTCTCAGTGGAGTGAGGGAGGCA
AGGTTGTCAAGCTTGCATACTGGAGAGTGAGGCTGTGGGAATGCAAGATG
AGGCAGAATTCCCGAGGTGACAGACAGCGTGAGAGAGCACTGACACAAAG
AGGCTGGGTGGTCAGGTGGGTCCTGGAGCTGAACGCCACACGACAGGATG
CCATATTTCCCTCTGACATTTGTGGGAGGAAGAGAGGGAGGGTAAGAGAA
AGAATATGGATGCGTTGAAAGACCTCTTTTTTTGGAGATTTTCAATGCTC
ACTATCTCGCCGGTTTGTATTTGATTCCATTTAATCTTATTTTTTCCTTT
AAACGCCCTTTGTTCCACTTTTGACTCTTG

Query= MSMg01no511_j01.b1 MSMg01no511_j01.b1 CHROMAT_FILE:
MSMg01no511_j01.b1 PHD_FILE: MSMg01no511_j01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:28 2005
         (618 letters)



>mm_chr13_69662011_69663028
          Length = 1018

 Score = 1025 bits (530), Expect = 0.0
 Identities = 530/530 (100%)
 Strand = Plus / Minus

                                                                        
Query: 89   ggacagggagctctgtcctacttgagaggggctcttctcctttctgtaagacagtttata 148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1018 ggacagggagctctgtcctacttgagaggggctcttctcctttctgtaagacagtttata 959

                                                                        
Query: 149  ggtgactcttcagagcattgatgcctatcgtttattcactgtttcttacataagggtacc 208
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 958  ggtgactcttcagagcattgatgcctatcgtttattcactgtttcttacataagggtacc 899

                                                                        
Query: 209  ccctgctgatgtaaacttaaggctgttctgtctcagcctcccagcttccaagattacaaa 268
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898  ccctgctgatgtaaacttaaggctgttctgtctcagcctcccagcttccaagattacaaa 839

                                                                        
Query: 269  cgtgagccatcatttctggcaccaattctaaaatactgatgaatcggtaaaactggctca 328
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838  cgtgagccatcatttctggcaccaattctaaaatactgatgaatcggtaaaactggctca 779

                                                                        
Query: 329  tatttttaaaagtggaagctttaaagtatctcagtcctatcacccagaaatcgccaggat 388
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778  tatttttaaaagtggaagctttaaagtatctcagtcctatcacccagaaatcgccaggat 719

                                                                        
Query: 389  aattagatgaccacagctgcagatggtattctccaagatcctggagatagtacttggagc 448
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718  aattagatgaccacagctgcagatggtattctccaagatcctggagatagtacttggagc 659

                                                                        
Query: 449  caccaacagaaaaactcactagaatcatcttcatgaaaactctagtaaattatttatttt 508
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658  caccaacagaaaaactcactagaatcatcttcatgaaaactctagtaaattatttatttt 599

                                                                        
Query: 509  gcttcagtaagaaacgtgcagtttcaaatagaaacccgggctcctgagagcgagtgctgt 568
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598  gcttcagtaagaaacgtgcagtttcaaatagaaacccgggctcctgagagcgagtgctgt 539

                                                              
Query: 569  ggctgagaatgtaaactgacaaagcccgagtgcagaaggtcgtgctaaca 618
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538  ggctgagaatgtaaactgacaaagcccgagtgcagaaggtcgtgctaaca 489


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space:   612864
Effective search space used:   612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no511_j01.g1 MSMg01no511_j01.g1 CHROMAT_FILE:
MSMg01no511_j01.g1 PHD_FILE: MSMg01no511_j01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:28 2005
         (385 letters)



>mm_chr13_69489817_69490601
          Length = 785

 Score =  729 bits (377), Expect = 0.0
 Identities = 383/385 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgtacttcccatggatggaccagagtaaaggatgggactcaggctggaagaccatgcaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgtacttcccatggatggaccagagtaaaggatgggactcaggctggaagaccatgcaa 260

                                                                       
Query: 61  tggtcacctgtgccacttcagctgctcctgggtaagggctgaagaaaggaaatggtctta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggtcacctgtgccacttcagctgctcctgggtaagggctgaagaaaggaaatggtctta 320

                                                                       
Query: 121 gaggggttctgtcatagagacagcacagagacaggagacaagcagaggatgtaggatcaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaggggttctgtcatagagacagcacagagacaggagacaagcagaggatgtaggatcaa 380

                                                                       
Query: 181 catcaggaaggagttgtgacagtaaccatccgttgtgtaaaagcgttgagggaccagcat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catcaggaaggagttgtgacagtaaccatccgttgtgtaaaagcgttgagggaccagcat 440

                                                                       
Query: 241 aaggtttgtggaaaggccactggatctgggggttggtgtgatatagcgcactagggaagg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaggtttgtggaaaggccactggatctgggggttggtgtgatatagcgcactagggaagg 500

                                                                       
Query: 301 gtgtggtctcagtggagtgagggaggcaaggttgtcaagcttgcatactggagagtgagg 360
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 gtgtggtctcagtggagtgagggaggcaaggttgtcaagcttgcagactggagagtgagg 560

                                    
Query: 361 ctgtgggaatgcaagatgaggcaga 385
           ||||||||| |||||||||||||||
Sbjct: 561 ctgtgggaaggcaagatgaggcaga 585


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 785
Length adjustment: 9
Effective length of query: 376
Effective length of database: 776
Effective search space:   291776
Effective search space used:   291776
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)