XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTGT
TCTCCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCTGAAGTCC
ACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCCCCTATCCGATTT
GGGATAGGTAAAGATCCTTTCCAAATCTGTTGGTGGCCTTTTTGTCATAT
TGACGGTGTCATTTGCTTTGCAGAAGCTTTGCAATTTTATGAGGTCCCAT
TTATCGAATCACAATCGTACAGCACAAGCCATTGCTGTTCTATTCAGGAA
TTTTCCCCGGTACCCAAATCTTCGAGGCTTTTCCCTACTTTCTCCTCTGT
AAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTAATCCACTTAGATT
TGACCTTAGTACAAGGAGATAGAAATGGATCAATTCGCAATCTTCTACAT
GCTAACTGCCAGTTGTGTCAGCACCATTTGTTGAAAATGCTGTCTTTTTT
CCACTGGATGGTTTTAGCTCCCTTGTCAAAGATCAAGTGACCATAGGTGT
GTGGGTTCATCTCTGGCTCTTCAATTCTGTTCCATTGGTCTACTTGTCTG
TCACTATACCAGTACAATGAAGTTTTTATCACAATTACTCTGTAGTACAG
TTTTAGGTCAGGCATGGTGATTCCACCAGAGGNTCTTTTATACATGAGAA
AAAGTTTTGCTATCCTAGGGTTTTTGGTATTCCAGATGAATCTGCAGATT
GCCCTTACTAA

ATTGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTCCTATTTCCACCTCTCATTTCTGCCAAAGAGC
ACCAGGATTTCAGTTGCTCAGGCTATGTGCCCAGCTTTACATGAGCTCTA
GGGCTTTGAACTCTGGTCTTTCCTGTTGCTCAGGAAGCATTTTACACCTC
ACGCAGCTCTAACTTCAGCTCTTCATATTTTATGAGCACACATGGCTGGT
GGACCCAGCTCAGGTCAGAGGAATCTGGTGACCTGCCAAGGTCCCTAAGA
GAGAGGAAGATCAAGTTATACCTAAGCTTCCGAGGGGACTTAATCTCTGT
GGTTGATGATGTCCATTGGGTAGAAGTGGACACAAGAATGAAAAATCCCC
ATGACCTGGCCTATTCATGTATGTCATCACCTCATAGATAGCATGACTAT
CCCCACTATGAATTCCAGGTTACAGATGAGTAGCAGCACCCATGGAGCCA
AGTGTATGTAATACCAGGCCTAAGGTTTCCTAAGCCCGCACCCTCAGCAC
TGCCACAGGGGTGGGGACAGTGCGAGACTGAGGCTTTGGCATACTGAGAT
GTGCTGTGAAAACTGAAGAAGGGCATTCAGCTCACTCCGGTGACTCCTGA
GACAACTGTGTGGGTGAGATTGAGGATGTAGTGGTANAATTGGGAGAGCT
GACCCCCAGGGGCTGGGTGGGAGTCTTTGGGGGGCTTGTCAACAGCCCTA
ATAGGGTGCGACACACCTGAAGCA

Query= MSMg01no512_i24.g1 MSMg01no512_i24.g1 CHROMAT_FILE:
MSMg01no512_i24.g1 PHD_FILE: MSMg01no512_i24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:46 2005
         (552 letters)



>mm_chr13_12762939_12763890
          Length = 952

 Score = 1067 bits (552), Expect = 0.0
 Identities = 552/552 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcctatttccacctctcatttctgccaaagagcaccaggatttcagttgctcaggctatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 tcctatttccacctctcatttctgccaaagagcaccaggatttcagttgctcaggctatg 693

                                                                       
Query: 61  tgcccagctttacatgagctctagggctttgaactctggtctttcctgttgctcaggaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 tgcccagctttacatgagctctagggctttgaactctggtctttcctgttgctcaggaag 633

                                                                       
Query: 121 cattttacacctcacgcagctctaacttcagctcttcatattttatgagcacacatggct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 cattttacacctcacgcagctctaacttcagctcttcatattttatgagcacacatggct 573

                                                                       
Query: 181 ggtggacccagctcaggtcagaggaatctggtgacctgccaaggtccctaagagagagga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ggtggacccagctcaggtcagaggaatctggtgacctgccaaggtccctaagagagagga 513

                                                                       
Query: 241 agatcaagttatacctaagcttccgaggggacttaatctctgtggttgatgatgtccatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 agatcaagttatacctaagcttccgaggggacttaatctctgtggttgatgatgtccatt 453

                                                                       
Query: 301 gggtagaagtggacacaagaatgaaaaatccccatgacctggcctattcatgtatgtcat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gggtagaagtggacacaagaatgaaaaatccccatgacctggcctattcatgtatgtcat 393

                                                                       
Query: 361 cacctcatagatagcatgactatccccactatgaattccaggttacagatgagtagcagc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 cacctcatagatagcatgactatccccactatgaattccaggttacagatgagtagcagc 333

                                                                       
Query: 421 acccatggagccaagtgtatgtaataccaggcctaaggtttcctaagcccgcaccctcag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 acccatggagccaagtgtatgtaataccaggcctaaggtttcctaagcccgcaccctcag 273

                                                                       
Query: 481 cactgccacaggggtggggacagtgcgagactgaggctttggcatactgagatgtgctgt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 cactgccacaggggtggggacagtgcgagactgaggctttggcatactgagatgtgctgt 213

                       
Query: 541 gaaaactgaaga 552
           ||||||||||||
Sbjct: 212 gaaaactgaaga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 952
Length adjustment: 10
Effective length of query: 542
Effective length of database: 942
Effective search space:   510564
Effective search space used:   510564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)