Query= MSMg01no512_m09.b1 MSMg01no512_m09.b1 CHROMAT_FILE:
MSMg01no512_m09.b1 PHD_FILE: MSMg01no512_m09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:03 2005
(575 letters)
>mm_chr13_70862923_70863897
Length = 975
Score = 1033 bits (534), Expect = 0.0
Identities = 561/570 (98%)
Strand = Plus / Minus
Query: 4 ggaattccaggttgtgaaggagtcagacaaaacaaagctgcggtgagacagagtgaggag 63
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 ggaattccaggctgtgaaggagtcagacaaaacaaagctgcggtgagacagagtgaggag 714
Query: 64 ccagccccaaccagacaaagcagatcaggaacagctcttcccccctgtctgcctgtctgt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 ccagccccaaccagacaaagcagatcaggaacagctcttcccccctgtctgcctgtctgt 654
Query: 124 cctctagatctagccaaagctccccatttgaaacaatccctcccagcctagcccagagac 183
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 653 cctctagatctagccaaagctccccatttcaaacaatccctcccagcctagcccagagac 594
Query: 184 tccagtgtctagtatctgcatgagactttaagataaagaaaatctcctatacccctcaaa 243
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 593 tccagtgtctagtatctgcatgagactttaagataaaaaaaatctcctatacccctcaaa 534
Query: 244 attcctgtggcaaaactcacccttccccacctccatatccagtattattgcttatctttg 303
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 533 attcctgtggcaaaactcacccttccccacccccatatccagtattattgcttatctttg 474
Query: 304 taattctgagcctgtctggtaagccagggcagccaggtctcagctccagtgggtgctcat 363
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 473 taattctgagcctgtctggtaagccagggcagccagttctcagctcccgtgggtgctcat 414
Query: 364 gcctctgtgtctcagaggacacatcaaccccccttggagctatttctgcaagcccactcc 423
|| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 413 gcatctgtgtctcagaggacacatcaaccccccttggggctatttctgcaagcccactcc 354
Query: 424 tgcctcaggctagagcaggacaggaagcaagcttcatatgctctctctgccctggtcttt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tgcctcaggctagagcaggacaggaagcaagcttcatatgctctctctgccctggtcttt 294
Query: 484 ccagaactctggcatgttgcccttctcccaagcttcttatcatcttcctttactgtaagc 543
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ccacaactctggcatgttgcccttctcccaagcttcttatcatcttcctttactgtaagc 234
Query: 544 atgccatgcctctagacttcaggaagctga 573
||||||||||||||||||||||||||||||
Sbjct: 233 atgccatgcctctagacttcaggaagctga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space: 545225
Effective search space used: 545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no512_m09.g1 MSMg01no512_m09.g1 CHROMAT_FILE:
MSMg01no512_m09.g1 PHD_FILE: MSMg01no512_m09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:03 2005
(572 letters)
>mm_chr13_70648473_70649443
Length = 971
Score = 1038 bits (537), Expect = 0.0
Identities = 564/573 (98%), Gaps = 3/573 (0%)
Strand = Plus / Plus
Query: 1 ccaggcacagctggcactggggaaactgcaaagcccacaggccagactgtgctagcactg 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 ccaggcacagctggcactggggaaactgcaaagcccacagaccagactgtgctagcactg 260
Query: 61 tggcctgatcatctccatatcttagagctgaccgactaccccaagcattctcagcataca 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 261 tagcctgatcatctccatatcttagagctgaccgactaccccaagcattctcaggacaca 320
Query: 121 tcactctacatggtctctaggctgcttcagaatttcttagggtctcttgcgtgtaaatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcactctacatggtctctaggctgcttcagaatttcttagggtctcttgcgtgtaaatac 380
Query: 181 agggctaccccctctcttctcatgggggcattcctttctgaacgtggaacaagaaaggga 240
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 agggctacccc-tctcttctcatgggggcattcctttctgaacgcggaacaagaaaggga 439
Query: 241 aggcctttctgctgtctcagtaggaccaagtgtctttgctagggtaacagtaaacacagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aggcctttctgctgtctcagtaggaccaagtgtctttgctagggtaacagtaaacacagc 499
Query: 301 ctttaacctacatctaacaaggaagtagagagctggaccccaacaccactaaagagctta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctttaacctacatctaacaaggaagtagagagctggaccccaacaccactaaagagctta 559
Query: 361 catttcccat-accttcctctcttcccatcctgccaaccatagctgtttccagccttctt 419
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 catttccc-tcaccttcctctcttcccatcctgccaaccatagctgtttccagccttctt 618
Query: 420 gcttctcatttcttacctaacctgtcttcagtcaaaaagctcaaaccccaggctggaaac 479
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gcttctcgtttcttacctaacctgtcttcagtcaaaaagctcaaaccccaggctggaaac 678
Query: 480 atggttcagaagctaaatgttcgatcttcaaggagtttctttcctgtactcatggcagga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 atggttcagaagctaaatgttcgatcttcaaggagtttctttcctgtactcatggcagga 738
Query: 540 ggctcacagctgtctgcacccccactcttgggg 572
|||||||||||||||||||||||||||||||||
Sbjct: 739 ggctcacagctgtctgcacccccactcttgggg 771
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 971
Length adjustment: 10
Effective length of query: 562
Effective length of database: 961
Effective search space: 540082
Effective search space used: 540082
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
