Query= MSMg01no513_f18.b1 MSMg01no513_f18.b1 CHROMAT_FILE:
MSMg01no513_f18.b1 PHD_FILE: MSMg01no513_f18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:49 2005
(642 letters)
>mm_chr13_6077241_6078282
Length = 1042
Score = 1218 bits (630), Expect = 0.0
Identities = 636/638 (99%)
Strand = Plus / Plus
Query: 5 gaattctgatatttctggtgattgcatactgtaatttgtgccagcccaaactcacattag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgatatttctggtgattgcatactgtaatttgtgccagcccaaactcacattag 264
Query: 65 gacttcatccccagagcggtaagagatgatgggcccttgaagagatatggtgggacacgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gacttcatccccagagcggtaagagatgatgggcccttgaagagatatggtgggacacgt 324
Query: 125 aggtgtctattgcctggcctaacagggattcagatacacattgcaagggtggcttcttat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aggtgtctattgcctggcctaacagggattcagatacacattgcaagggtggcttcttat 384
Query: 185 aagttggaggttgcttcctccatgagctctcttcactcacataatcccctctacttgcac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagttggaggttgcttcctccatgagctctcttcactcacataatcccctctacttgcac 444
Query: 245 ctgcttgcctttctgctttctcaccatgcatgagttaacatcactgagaccttcaacttg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctgcttgcctttctgctttctcaccatgcatgagttaacatcactgagaccttcaacttg 504
Query: 305 aatagaagagataccagggctgtgttctcagccagagttctagggctaaataaatctagt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aatagaagagataccagggctgtgttctcagccagagttctagggctaaataaatctagt 564
Query: 365 gtgttagtttctatgctgttggaaagtgaaactctagatcctgcatggatggtaacagaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtgttagtttctatgctgttggaaagtgaaactctagatcctgcatggatggtaacagaa 624
Query: 425 agtattagaggcaacaaatcagcaggctccaaagctcagccatctcaatgatcagtgatg 484
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agtattagaggcaacaaatcaacaggctccaaagctcagccatctcaatgatcagtgatg 684
Query: 485 taagtggtgtcttgttcctgtgagtgaacaccagttacgtaggtggatacatgtatgtat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 685 taagtggtgtcttgttcctgtgagtgaacaccagttacgtaggtggatacatgcatgtat 744
Query: 545 atgtgtgaattctaaacaggtggtggcagcttcctcagccagcactcttgcggcttcttt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atgtgtgaattctaaacaggtggtggcagcttcctcagccagcactcttgcggcttcttt 804
Query: 605 taccacacaatgggcatgcatgcacatgtgtatagatg 642
||||||||||||||||||||||||||||||||||||||
Sbjct: 805 taccacacaatgggcatgcatgcacatgtgtatagatg 842
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space: 652224
Effective search space used: 652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no513_f18.g1 MSMg01no513_f18.g1 CHROMAT_FILE:
MSMg01no513_f18.g1 PHD_FILE: MSMg01no513_f18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:50 2005
(141 letters)
>mm_chr13_6197236_6197775
Length = 540
Score = 246 bits (127), Expect = 5e-70
Identities = 136/141 (96%), Gaps = 4/141 (2%)
Strand = Plus / Minus
Query: 5 caagagggaggagtgactgagaaaaactgacaggagagcacttagcaataacaaggtttt 64
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 334 caagagggaggagtgactgagaaaaactgacaggagagtacttagcaataacaaggtttt 275
Query: 65 aaaggagttgttgaaagtaggccatgttgttcaggtattacctggggatggggtgagggt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaggagttgttgaaagtaggccatgttgttcaggtattacctggggatggggtgagggt 215
Query: 125 ggg----gtggggtgagaaat 141
||| ||||||||||||||
Sbjct: 214 gggtggggtggggtgagaaat 194
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 141
Length of database: 540
Length adjustment: 8
Effective length of query: 133
Effective length of database: 532
Effective search space: 70756
Effective search space used: 70756
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
