TATAAGTTAGGNNNCATGGTGTCTCTTTATTCTTTGNNNNNNNNGGCGCG
GGNNNNNNCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATGTC
GAGAGGATCCGCGGAATTCTTATGTATGCGTTTCTGGAAGCATGAGTTCA
TGTAAAAACCCCCACAGCTTTCCCATCTTTATTAATGACAAGACNACCCA
TATTAGCACTTCCAGGGAATGATTATTTTTTTTAAAGTGGGCAAAAAGGC
GAACCAAAATTGGAAGGGATTTTAAAAAATAAAACCCTGGGGGGCGGGTT
TTTTTTCCCCTCCCCGAAAAAAAAGAACCCTCTTTTTCTCCGAAACCCCC
CTTTTAAAAAACCCCCCCCCCGGGGAAAACCTTTCACCTTTTTTCTTTAA
AAAAAAAACCCCCTCCCCGGGGGGCAAATATAAAAAAAATTTTTTCTCCC
CCCCAAAAAAAAATATAATAAGAGGTGTGTTTTTCCCTCCTGTAAACCCC
CCTCTCCCCCTCAAAAAAAAATATTTTTTTTCTCCCCCCCCGGGGAGAAA
AAAAAAAACTCCCCCCCTCTCTTTCTTCCTTTAAAATAATTTTTTTTTAA
CAAAAACCCTCTCTCTCTCTCTTTTTTAAAAACACCCCCTTCTTGTGTTT
TGGAAAAAAAAAAAAACATCCCGGCGGGGGTGGTTTTTTTTTATACCTCT
TCTCCCTTTTCCC

NCAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAACATATAGTTGAGTCTTTGGACA
AAGGGCCCAGTGAAAGCCCCCAAACAACTCATGCTTCTAACAGGACTATT
GGTTTCTTACACAAACTAATGGCAAGTTTCCATAGTTGAAGACAGCACTT
ATATATCTCCATTAACACAGAGAAGATGATCTGGTGTCTAACTAGAGACT
TTACTTCTAGTAGTCAGTGTTCATGGTACAGAAAAGTTCTCTGTAAACTA
CCAGAGGAGAAAAGTATGTACCAATCCTGCTAAAAATCCTGCTATCTGCA
CCAGTGCCCTGCCTGAATGACATGGTAACAACCATGACACTCATCCTGTA
CATGGCCAAATTAGACTAAGAAGCTCAGAGCAAAGAATATGTTTGAAGAC
TTTTTTTTTTAGGAGAGAGAACAGTATTCCAAATTTCTCCCAAAACAAAG
AAGACAAAAGATTGTCTATCCATGTCTAGAAGGGAACTTCAAAAATGTTA
CCTGAAGGCACCCTATTGAACTGTCAATCACAATTTTCCTACCCAAAGGA
ATTGGGTGAGTACAGAGCTAAATCGTATATAANGGATTGGGAAATGTTGC
TAAAGGATGCTCAAACTACACTTCCACATCATCCGAAGGTTTAAAGGGGG
AGTTGGGCAAAAGAAAACCTTGT

Query= MSMg01no514_j02.g1 MSMg01no514_j02.g1 CHROMAT_FILE:
MSMg01no514_j02.g1 PHD_FILE: MSMg01no514_j02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:31 2005
         (517 letters)



>mm_chr13_26454303_26455218
          Length = 916

 Score =  857 bits (443), Expect = 0.0
 Identities = 497/515 (96%), Gaps = 3/515 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aacatatagttgagtctttggacaaagggcccagtgaaagcccccaaacaactcatgctt 60
           |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 203 aacatatagttgagtctttggacaaagggcccagtgaaagcctcaaaacaactcatgctt 262

                                                                       
Query: 61  ctaacaggactattggtttcttacacaaactaatggcaagtttccatagttgaagacagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ctaacaggactattggtttcttacacaaactaatggcaagtttccatagttgaagacagc 322

                                                                       
Query: 121 acttatatatctccattaacacagagaagatgatctggtgtctaactagagactttactt 180
           |||||||||||| || | | ||||| ||||||||||||||||||||||||||||||| ||
Sbjct: 323 acttatatatct-cagtca-acagacaagatgatctggtgtctaactagagactttattt 380

                                                                       
Query: 181 ctagtagtcagtgttcatggtacagaaaagttctctgtaaactaccagaggagaaaagta 240
           ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 381 ctagtagtcagtgttcatggttcagaaaagttctctgtaaactaccagcggagaaaagta 440

                                                                       
Query: 241 tgtaccaatcctgctaaaaatcctgctatctgcaccagtgccctgcctgaatgacatggt 300
           |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 441 tgtaccaatcctgctaaaaatcctgctatctgcagcagtgccctgtctgaatgacatggt 500

                                                                       
Query: 301 aacaaccatgacactcatcctgtacatggccaaattagactaagaagctcagagcaaaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 501 aacaaccatgacactcatcctgtacatggccaaattagactaagaagctgagagcaaaga 560

                                                                       
Query: 361 atatgtttgaagacttttttttttaggagagagaacagtattccaaatttctcccaaaac 420
           |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 561 atatgtttgaagacctttttttt-aggagagagaacagtattccaaatttctcccaaaac 619

                                                                       
Query: 421 aaagaagacaaaagattgtctatccatgtctagaagggaacttcaaaaatgttacctgaa 480
           ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 620 aaagaagacaaaagattttctatccatgtctagaagggaacttcaaagatgttacctgaa 679

                                              
Query: 481 ggcaccctattgaactgtcaatcacaattttccta 515
           ||||||||||| |||||||||||||||||||||||
Sbjct: 680 ggcaccctatttaactgtcaatcacaattttccta 714


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 916
Length adjustment: 10
Effective length of query: 507
Effective length of database: 906
Effective search space:   459342
Effective search space used:   459342
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)