Query= MSMg01no515_e22.b1 MSMg01no515_e22.b1 CHROMAT_FILE:
MSMg01no515_e22.b1 PHD_FILE: MSMg01no515_e22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:34 2005
(679 letters)
>mm_chr13_102065171_102066248
Length = 1078
Score = 1282 bits (663), Expect = 0.0
Identities = 672/675 (99%), Gaps = 1/675 (0%)
Strand = Plus / Minus
Query: 5 gaattcatctctgaaacctccacaacagaaggcgagaactgactcccaaacgttgtcctc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986 gaattcatctctgaaacctccacaacagaaggcgagaactgactcccaaacgttgtcctc 927
Query: 65 tgacctccacacatgcactgtggtccataacccctcacttctcagtatcaacgcatacaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 926 tgacctccacacatgcactgtggtccataacccctcacttctcagtatcaacgcatacaa 867
Query: 125 tttttaaaataaatcaaatttgttgctttttaactttttattagagtttctaatagttat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 tttttaaaataaatcaaatttgttgctttttaactttttattagagtttctaatagttat 807
Query: 185 ttttaacactatctccgtctttacttctgaagttatttataaaataaatattaaagatat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 ttttaacactatctccgtctttacttctgaagttatttataaaataaatattaaagatat 747
Query: 245 cccaaggattaaaacttaattaaattttgttattatcacagtgatcgtcactggagtcca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 cccaaggattaaaacttaattaaattttgttattatcacagtgatcgtcactggagtcca 687
Query: 305 tggccttcagattttgttctgagaaagagaccacatcctgattcatggactcctaggcac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tggccttcagattttgttctgagaaagagaccacatcctgattcatggactcctaggcac 627
Query: 365 cagcaaatatgagctgccctgttgccaccctaaaagaaatgtgggggcaccagtgtacct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 cagcaaatatgagctgccctgttgccaccctaaaagaaatgtgggggcaccagtgtacct 567
Query: 425 gcctgataccatgcaagatacgaaagacagatgtgcagctttatgtggccaggtacggac 484
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gcctgataccatgcaagatacaaaagacagatgtgcagctttatgtggccaggtacggac 507
Query: 485 ctgcatcctgaattgtgagggggggacacagtgcagagccagccacacgtcacccctgac 544
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 506 ctgcatcctgaattgtga-ggggggacacagtgcagagccagtcacacgtcacccctgac 448
Query: 545 caccctcactgtcacctacttctgctgcttcatacaagagtgacagccattgaaagcctt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 caccctcactgtcacctacttctgctgcttcatacaagagtgacagccattgaaagcctt 388
Query: 605 gccaccacctcccatactttttagcccaacttaaaaacaaaaaggagtcgggcagtggtg 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gccaccacctcccatactttttagcccaacttaaaaacaaaaaggagtcgggcagtggtg 328
Query: 665 gtgcacacctttaac 679
|||||||||||||||
Sbjct: 327 gtgcacacctttaac 313
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1078
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1068
Effective search space: 714492
Effective search space used: 714492
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no515_e22.g1 MSMg01no515_e22.g1 CHROMAT_FILE:
MSMg01no515_e22.g1 PHD_FILE: MSMg01no515_e22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:34 2005
(666 letters)
>mm_chr5_135608042_135609107
Length = 1066
Score = 1241 bits (642), Expect = 0.0
Identities = 660/666 (99%)
Strand = Plus / Plus
Query: 1 cttcttcctgaagaccctaagaccaagatcccatctgctcctggaccgacccctctcctt 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 cttcttcctgaagaccctaagaccaagatcccacctgctcctggaccgacccctctcctt 260
Query: 61 ccattccccacccctgtcaaggtgcatggcttagagccctgcaccccctctcccttcccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccattccccacccctgtcaaggtgcatggcttagagccctgcaccccctctcccttcccc 320
Query: 121 acaatggctccgcccccctctttgttgccagaagaatctctcctctctgccaggttccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaatggctccgcccccctctttgttgccagaagaatctctcctctctgccaggttccca 380
Query: 181 ttcacctcggcccctcctgctccaggagtgtctacgcttcctgcacccacaacctttgtc 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcacctcagcccctcctgctccaggagtgtctacgcttcctgcacccacaacctttgtc 440
Query: 241 cctaccccacagcccggccctggtcccgtacccttccctgtagaccatctgccccatggg 300
|| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 441 cccaccccacagcccggccctggtcccgtccccttctctgtagaccatctgccccatggg 500
Query: 301 tacctggaacccgtctttgggcctcacttcactgtgcctcagagtatgcaacccaggtgc 360
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 tacctggaacccgtctttgggcctcacttcactgtgcctcagggtatgcaacccaggtgc 560
Query: 361 aagccctcctccccatcccctgggggacaaaaagcaagtccacccaccttggcctctgcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagccctcctccccatcccctgggggacaaaaagcaagtccacccaccttggcctctgcc 620
Query: 421 accgccagtcccactgccactgccactgccagagacaacaacccctgtcttacacagctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 accgccagtcccactgccactgccactgccagagacaacaacccctgtcttacacagctg 680
Query: 481 ctcagggcaggtgagatgggagaggcgaatggacgagatactgggaggaagcgactctga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctcagggcaggtgagatgggagaggcgaatggacgagatactgggaggaagcgactctga 740
Query: 541 aaggcatgggaaagcctgaaaggcagagggctggggtctcagggtggtcttgggagacag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaggcatgggaaagcctgaaaggcagagggctggggtctcagggtggtcttgggagacag 800
Query: 601 agaaggtggagtgatattagggatgtgagctatgtctgacaggggtgtgtgggctgctgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 agaaggtggagtgatattagggatgtgagctatgtctgacaggggtgtgtgggctgctgg 860
Query: 661 ggacaa 666
||||||
Sbjct: 861 ggacaa 866
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
