NNCCCAAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTTGTTCACCTCTGAACCCCATCTTTTAATGGGGTTATTTGAT
TTTCAGGAGTCCACCCTCTTGTGTTCTTTATATATATTGGATATTAGTCC
CCTATCTGATTTAAGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCT
TTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAGCTTTGCAGTTT
CATGAGGTCCCATTTGTCAATCCTCGATCTTACAGCACAAGCCATTCCTG
TTCTATTCAGGAATTTTTTCCCTTTGCCCATATCTTCGAGACTTTTCCCC
ACTTTCTCCTTTATAAGTTTCAGTGTCTCTGGTTGTATGTGAAGTTCCTT
GATCCACTTAGATTTGATCTTAGTACAAGGAGAGAGGAATGGGTCGATTC
GCATTCTTCTACATGAGAACAACCAGTTGTGCCAGCACCATTTGTTGAAA
ATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAA
GTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTACATT
GGTCTACTTGTCTGTCACTATACCAGTACCATGCCGTTTTTATCACAATT
GCTCTGTAGTAAAGCTTTAGGTAAGGCATGGTGATTCCACCAGAGGATCT
TTTATCCTTGAGAAGAGCTTTTGCTATCCTAGGTTTTTTGTTATTCGAGA
TGAATTTGCAA

TGTGCAATGATATGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTGCTTGGCAGGAGTCAGGGATGG
CAGTTACTAGTGAACGGGCCAGAATCCCAGTCATGCAAAATAAATAAGAT
CCAGAGACCCACAGCAACACTGTGCGGCTCCTGAAAGTGTGTGAATCTTA
CACTGGTCCTTACCTGTATAGAGAAGACTAAAACCAAGGAAAAAAGATAA
CAGAATGAATGCAAAAGCCCTCACAAATACACCTCACACTGAGAGACCAG
ATCACACCCACTAGGACTGCTGTTCCCAGCAACACCTTTACCTGCAGCCT
CACCCAGAGACTCCTGGAGTGGAGGAAACCTCAGGTATGTTTGACTTCTA
TGTCCTGTATCTTCCTCTACATAGCAACAGTCACTTCTGGTTGCTGTGAG
AAAATGTCTGGCAACTTAAGGAAGGAAGAGTTTATTTCTGGCTCACCATT
CAGGGTTTCAGTCCATCACAACACAGGGAGGCATAGTGGCAGAGATGGGA
GGCTTCCTGGCATGCATCTGCAGCTGGAGAGCAGAGAGACATGAATGATG
GTGCCCAGCTCACCTCCTCTATTTAGTCAAAGACCAATGCCTGTCAGATG
GTTCCACCCGCATTCTAGGTGGATCATCCCTTCTTTCTTTAAATAGCCTC
TCAAGCAATGTACTAAGTCCAGTAAACAATGAAGCTTAGCCATCACATAC
ACACCTAGGAATAACATC

Query= MSMg01no516_a08.g1 MSMg01no516_a08.g1 CHROMAT_FILE:
MSMg01no516_a08.g1 PHD_FILE: MSMg01no516_a08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:35 2005
         (571 letters)



>mm_chr13_9680604_9681574
          Length = 971

 Score = 1038 bits (537), Expect = 0.0
 Identities = 547/551 (99%), Gaps = 2/551 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgcttggcaggagtcagggatggcagttactagtgaacgggccagaatcccagtcatgca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tgcttggcaggagtcagggatggcagttactagtgaacgggccagaatcccagtcatgca 492

                                                                       
Query: 61  aaataaataagatccagagacccacagcaacactgtgcggctcctgaaagtgtgtgaatc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 aaataaataagatccagagacccacagcaacactgtgcggctcctgaaagtgtgtgaatc 432

                                                                       
Query: 121 ttacactggtccttacctgtatagagaagactaaaaccaaggaaaaaagataacagaatg 180
           | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tcacaccggtccttacctgtatagagaagactaaaaccaaggaaaaaagataacagaatg 372

                                                                       
Query: 181 aatgcaaaagccctcacaaatacacctcacactgagagaccagatcacacccactaggac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 aatgcaaaagccctcacaaatacacctcacactgagagaccagatcacacccactaggac 312

                                                                       
Query: 241 tgctgttcccagcaacacctttacctgcagcctcacccagagactcctggagtggaggaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tgctgttcccagcaacacctttacctgcagcctcacccagagactcctggagtggaggaa 252

                                                                       
Query: 301 acctcaggtatgtttgacttctatgtcctgtatcttcctctacatagcaac--agtcact 358
           |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||
Sbjct: 251 acctcaggtatgtttgacttctatgtcctgtatcttcctctacatagcaacatagtcact 192

                                                                       
Query: 359 tctggttgctgtgagaaaatgtctggcaacttaaggaaggaagagtttatttctggctca 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tctggttgctgtgagaaaatgtctggcaacttaaggaaggaagagtttatttctggctca 132

                                                                       
Query: 419 ccattcagggtttcagtccatcacaacacagggaggcatagtggcagagatgggaggctt 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 ccattcagggtttcagtccatcacaacacagggaggcatagtggcagagatgggaggctt 72

                                                                       
Query: 479 cctggcatgcatctgcagctggagagcagagagacatgaatgatggtgcccagctcacct 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71  cctggcatgcatctgcagctggagagcagagagacatgaatgatggtgcccagctcacct 12

                      
Query: 539 cctctatttag 549
           |||||||||||
Sbjct: 11  cctctatttag 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space:   539121
Effective search space used:   539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)