NNNNTTTTTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCAAAGCCATCTTGGCCAATTTAGTGAGACCTGTATCAA
AATAAAATGTAATGAGGATTTGCAGCATAGCTCAGTGATAGAAAGTGTAC
CTACCATGTGCAAATCCCTAGGTTCTATCACCAATAGCAAAAAAATAGGA
AAACTCCATTTAGATAAGCCTATACCATAACACTCAATATATGAAGTGCA
CAGGAAGGCAAACTAGTGTCCAAATTCACCAACCTAGTTATTTCTACTAA
ACTAATTCTTCCAAGACATTAGGCATTACAAATATTCACATTTGGATGGC
TGATAAACTCATTTGAATCAACTAACTACATGTGACATTAAAATGGAGGA
GGACTGTTATAATTGGATCATAGAACTTAAACATGGTTTTGCTCATAAAA
CAACATAAAAACCTCCTAGTTTACCAATACTTTTACATTAGGAATAGGTA
GTGTAACTTTTACTGATGCACTTCTTTTTTTTTTTTTGAGCTTTATTTAT
TTATTTTATTTTATTTTTTTACTATACTGGTTAATATAAAATGTATGGCA
TGTTTTCTTATCCCCTGCGTTCAGGAGGGAACCCATGACATTCTCAGATA
GTACTCCAAAAGAACAGGCCCTACTCTTTAAAACAGCAGAGGTGGNAAGG
AACAAACAGNCAGTCTCTCTGTGTTCTTGAAGATCAACTACGGAGTTTCA
GN

CCAAATATCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATGAAATACCTAATTA
CATACCCAAACTTATGGGACACAATGAAGGTAATTCTGAAAAGCATGTTC
AGAGTACTAGGTTGCTACATTTAAACAATTTTGGAGTTATCTCATACTAG
CTACTTAATACCTCATACTTGAAAGCTCTAGAGCTAAAATAAGTAATCAC
AGCTTGTTCTGTATGTTTAGCATTTTGATTGTAATGCACCAGGGGACTTT
CTTTTCTGGTCAAATCTATTTAGTGTTCTGTTTCTGGTACTTTGGTAGGC
ATCTCCTTTGGGTTAGGAAATTTTTCTTCTATGATTTTGCTGAAAATAAT
TCTGTAGTTTTTGTTCAAATTCCTAAATTCACAGGGAATGCTTATTGGTG
TTGGAGGCTGAGTTGAAAGTGGGAAGATTAGAGGATCTTTGTTATTCTTA
GGAATAGGGTCAGAGAGGAAAGGGAAACCACAGCAGGTTTCCTGCTACAG
AGCTGGAGATGAGATAGGATCTCTGGAGTAGTAGGAGAGGTATAAGTCTG
CCTTCGGCTTATTTCTTGTCCTGGGAGAAGCAGCCCTCGGGACAACAGGA
GTTGGGGTCTAGGACAAAGCAACAAGTGTCAGGGAAGAAGGTTTAGAGAG
GAAATCTGTGGGATCCACAGGAGATGTATGCCAGGGGCAGGGTGGCN

Query= MSMg01no516_b10.b1 MSMg01no516_b10.b1 CHROMAT_FILE:
MSMg01no516_b10.b1 PHD_FILE: MSMg01no516_b10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:40 2005
         (567 letters)



>mm_chr13_97150565_97151531
          Length = 967

 Score =  762 bits (394), Expect = 0.0
 Identities = 454/482 (94%), Gaps = 14/482 (2%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaaagccatcttggccaatttagtgaga-cctgtatcaaaataaaatgtaatgag 63
           ||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 828 gaattcaaagcaatcttgtccaatttagtgagaccctgtatcaaaataaaatgtaatgag 769

                                                                       
Query: 64  gatttgcagcatagctcagtgatagaaagtgtacctaccatgtgcaaatccctaggttct 123
           ||||  || |||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 768 gattcacaccatagctcagtgatagaaagtgtacctaccatgtgcaaatccctaggttcc 709

                                                                       
Query: 124 atcaccaatagc-------------aaaaaaataggaaaactccatttagataagcctat 170
           ||||||||||||             ||||||| |||||||||||||||||||||||||||
Sbjct: 708 atcaccaatagcaaaaaaaaaaaaaaaaaaaaaaggaaaactccatttagataagcctat 649

                                                                       
Query: 171 accataacactcaatatatgaagtgcacaggaaggcaaactagtgtccaaattcaccaac 230
           || |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 648 actataacactcaatatatgaagtgcataggaaggcaaactagtttccaaattcaccaac 589

                                                                       
Query: 231 ctagttatttctactaaactaattcttccaagacattaggcattacaaatattcacattt 290
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 588 ctagttatttctactaaactaatccttccaagacattaggcattacaaatattcacattt 529

                                                                       
Query: 291 ggatggctgataaactcatttgaatcaactaactacatgtgacattaaaatggaggagga 350
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 528 ggatggctgataaactcatttgaatcaactaactacatgtgacattaaaatggaggaggt 469

                                                                       
Query: 351 ctgttataattggatcatagaacttaaacatggttttgctcataaaacaacataaaaacc 410
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 ctgttataattggatcatagaacttaaacatggttttgctcataaaacaacataaaaacc 409

                                                                       
Query: 411 tcctagtttaccaatacttttacattaggaataggtagtgtaacttttactgatgcactt 470
           |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 408 tcctagtttatcaatacttttacattaggagtaggtagtgtaacttttactgatgcactt 349

             
Query: 471 ct 472
           ||
Sbjct: 348 ct 347


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space:   533049
Effective search space used:   533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)