XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTAAC
ATCACATTCTTACAGGGATGTGCTCAGGACAGGGAGGTAAACACCATCTC
AATACACCAATTCCCTGCAGTGGGATCCCATGAACTCACCCAGGCATAAG
CAGGCCTGTCTCAGTGGTACCCTCGGCCCTTGCTGGCAGCCAGAGATAGG
AAACAACTGGCCTGCGGCACAATAAAAGCCAGCCACATCACATAAGCTCT
GAGAAGGAAATCTGCACGGGAGGAAGGAAGTCAGTGGCCTGTGGCAGTTA
GTGAAGTGCTAGAGAGTCAGCCATTGGCTTCGAGAAGGAAAGGCCTGCTG
GCCTGTGGTACGCACAGCACAGTGGGTGCAGAGGAGCGGTGAGGCCCAGA
CCCCAAGGCTGAGCTGGAGAAAGCCAGACGGAAGGATGGGGTGAGAGCTG
GCAGTGAGCTAGGGCACAGGAAGGTGACTGCAATGTCCTCATGAGACCCT
CCCAGGTGGAGCCCAAAAGGATTATTGTGTGTGACAGGAATGGGGAGACC
AGGGGACCACCTCAGCCGTTGTTTCTCAGGCACCATCCGCTTTGTTTCAG
TTTGTCTCTTCTGATCACTTGTGTATGAGCGTGTGTGGACATATGCGTGC
CACAGCATATGCATCGGGAGGTCAGAAGGCAGCTCAAAGGAGTTGGTTCT
CTGCTTCTGCCATATGGGGCCTGTGGATCAATTCAGATCACAGGTTCGGT
GGGCCGACAT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTT
CCGCGGATTCTTTCCCTGGGGAGATGTAACAGCACAACCTCCTCTTTTTA
GGTCCAGGACAACCAATTGGTTTAGCTGNAAACATGGTTGNGGGGGGAAC
ATTTGTCNTTTTTTGNNNNNNNNNNNGAATCATNAGTTTTGTTTNNNTTT
TNNNNNNNNNNNNNNNNNNNNNNNNTTTTTGGGTTTTAAGGGTTTTTTTT
TTTGGGGGGAAAAACCNNNNCTTGGTGTGGCTAAGTTTGGCGCTGTGCTG
GTGTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTT

Query= MSMg01no519_d10.b1 MSMg01no519_d10.b1 CHROMAT_FILE:
MSMg01no519_d10.b1 PHD_FILE: MSMg01no519_d10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:52 2005
         (632 letters)



>mm_chr13_52646407_52647437
          Length = 1031

 Score = 1106 bits (572), Expect = 0.0
 Identities = 614/628 (97%), Gaps = 1/628 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctaacatcacattcttacagggatgtgctcaggacagggaggtaaacaccatctc 64
           |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 205 gaattctaacatcacattcttacagggatgcgctcaggac-gggaggtaaacaccatctc 263

                                                                       
Query: 65  aatacaccaattccctgcagtgggatcccatgaactcacccaggcataagcaggcctgtc 124
           ||||||||| |||||||||||||||||||||||||||||||||| ||  ||| |||||||
Sbjct: 264 aatacaccagttccctgcagtgggatcccatgaactcacccaggtatgggcaagcctgtc 323

                                                                       
Query: 125 tcagtggtaccctcggcccttgctggcagccagagataggaaacaactggcctgcggcac 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tcagtggtaccctcggcccttgctggcagccagagataggaaacaactggcctgcggcac 383

                                                                       
Query: 185 aataaaagccagccacatcacataagctctgagaaggaaatctgcacgggaggaaggaag 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aataaaagccagccacatcacataagctctgagaaggaaatctgcacgggaggaaggaag 443

                                                                       
Query: 245 tcagtggcctgtggcagttagtgaagtgctagagagtcagccattggcttcgagaaggaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcagtggcctgtggcagttagtgaagtgctagagagtcagccattggcttcgagaaggaa 503

                                                                       
Query: 305 aggcctgctggcctgtggtacgcacagcacagtgggtgcagaggagcggtgaggcccaga 364
           |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 504 aggcctactggcctgtggtacgcacagcacagtgggtgcagagaagcggtgaggcccaga 563

                                                                       
Query: 365 ccccaaggctgagctggagaaagccagacggaaggatggggtgagagctggcagtgagct 424
           |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 564 ccccaaggctgagccggagaaagccagacggaaggatggggtaagagctggcagtgagct 623

                                                                       
Query: 425 agggcacaggaaggtgactgcaatgtcctcatgagaccctcccaggtggagcccaaaagg 484
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agggcacagggaggtgactgcaatgtcctcatgagaccctcccaggtggagcccaaaagg 683

                                                                       
Query: 485 attattgtgtgtgacaggaatggggagaccaggggaccacctcagccgttgtttctcagg 544
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 684 attattgtgtgtgacaggaatggggagaccaggggaccacctcagctgttgtttctcagg 743

                                                                       
Query: 545 caccatccgctttgtttcagtttgtctcttctgatcacttgtgtatgagcgtgtgtggac 604
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 744 caccatccgctttgtttcagtttgtctcttctgatcacttgtgtgtgagcgtgtgtggac 803

                                       
Query: 605 atatgcgtgccacagcatatgcatcggg 632
           ||||||||||||||||||||||||||||
Sbjct: 804 atatgcgtgccacagcatatgcatcggg 831


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1031
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1021
Effective search space:   635062
Effective search space used:   635062
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)