XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
AACCACTAGTGGATGCAGAGACGCCTGCACCAGGTACAGATCCCACAGGA
TGCCTGGCTTATACAATGCATTCCAAGCAAGTCTCTAACAGTGAAGCGGA
GTCCTCCTCAGGCTGCTTTTAACTGAAAGATCTGGACGGGGCTGGGTTTG
CCTTCCCACAACCCCACAAGACGGCCTCCTTTTCCCTTCCTTTGCTTCCT
TCTTCCCATTGTGGCTGCTGCCACAGCCCCTCACCCTTCCACCCTCTTCC
TTCCCTCATCTGTTCATTAACTGACTGACTGGTCCCAAAGGCCCCTGCGT
GTCTATGCAGACTCCGTAAGAACATATCTTCTCTTCACAAAATAAACAAG
CACGCTGCTCTTTTCAGTGTTTCCTCCCTCCAGAGGAGCTCCAGGGTGGC
TGGGCTAGACTGTTCTGGGAGGATTGGTCCTCTTGAGTTTTACAGCAGTT
CCCAAGCCCGGTGCTTCATTGTTCAGCAGACAACATAATAGCTTCATTTT
TCCCTTTATCAGACTAACTATTCTGCTCTGTATTTTGTTAAATTTCGAGT
CATCATTGGAGTAATCCTATACCTAGGGATATGTTTTCCCTCCTCACAGG
CTGCGCGCTGCACGCTGCTCTCTTCTCTGCCTCTCCTTTGCAGTCTTAAT
TGCCAGATCCTGGAGGTGACTCTACAGCANGGGAGCAACCCAAGGACCTC
TT

GGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXTTCTAGGACTTAGTGTTACTGGTCTGAATGGCAGGATGGAGGTG
ATATTTGTGGGTCGGCGGGGGGTGGGGGGCGGGGGGGGATCTCGNATCCC
CCTTTGNNNTCCTCAGCGGCGNNNNNNNNNNNNNCTTGTCCCACCTTGGA
GAATCNGGGTGAGTCGCTGCAGGGNNNNNNNNNNNNNNNNNNCNTTTNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NTTTTTTTTTTTTTTTTTTTTNNTNNTTTTTNNNNNNNTNTTNTTTTTTT
TTTNNNTNNNNNNNNNTTTTTTTTTTAANNAAAACACCACCCCCCCGCCC
CGGGGGTGGTGTCCCTCAAAAAAAACCCCGCCCCCCCCGGGGGTTTATGG
GGGGGGCCCTTTTAAACCCCCCCCCCCCCCCAAANAAGAGAGAAACAAAA
AGGCGGGGGGGGGGGGGGGTTTCTCTTTTTGGAGAAAAAATATTTTTTTT
CTTCTAAGAAAAAAAATTCTTCTTCCCTTACACCCCCCCCCCTCCCGGGG
GGGGGGGGGGGGGGAGCGCCCCCCCCCTGTGGGGGGCGCCCCCCCCCCCC
CCCCGGGGTCTTTTTTTTTTCAAAAAAAAAAACCTCCCTCTTTTTNTTTT
CTTTCTCCTTCCCGCGGGGGGGGGGGGGAGAAGGGGAGG

Query= MSMg01no519_f10.b1 MSMg01no519_f10.b1 CHROMAT_FILE:
MSMg01no519_f10.b1 PHD_FILE: MSMg01no519_f10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:01 2005
         (654 letters)



>mm_chr13_57706148_57707201
          Length = 1054

 Score = 1218 bits (630), Expect = 0.0
 Identities = 645/650 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaaccactagtggatgcagagacgcctgcaccaggtacagatcccacaggatgcc 64
           |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 205 gaattcaaccacaagtggatgcagagacgcctgcaccaggtacagatcccacaggacgcc 264

                                                                       
Query: 65  tggcttatacaatgcattccaagcaagtctctaacagtgaagcggagtcctcctcaggct 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tggcttatacaatgcattccaagcaagtctctaacagtgaagcggagtcctcctcaggct 324

                                                                       
Query: 125 gcttttaactgaaagatctggacggggctgggtttgccttcccacaaccccacaagacgg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gcttttaactgaaagatctggacggggctgggtttgccttcccacaaccccacaagacgg 384

                                                                       
Query: 185 cctccttttcccttcctttgcttccttcttcccattgtggctgctgccacagcccctcac 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cctccttttcccttcctttgcttccttcttcccattgtggctgctgccacagcccctcac 444

                                                                       
Query: 245 ccttccaccctcttccttccctcatctgttcattaactgactgactggtcccaaaggccc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccttccaccctcttccttccctcatctgttcattaactgactgactggtcccaaaggccc 504

                                                                       
Query: 305 ctgcgtgtctatgcagactccgtaagaacatatcttctcttcacaaaataaacaagcacg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctgcgtgtctatgcagactccgtaagaacatatcttctcttcacaaaataaacaagcacg 564

                                                                       
Query: 365 ctgctcttttcagtgtttcctccctccagaggagctccagggtggctgggctagactgtt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctgctcttttcagtgtttcctccctccagaggagctccagggtggctgggctagactgtt 624

                                                                       
Query: 425 ctgggaggattggtcctcttgagttttacagcagttcccaagcccggtgcttcattgttc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctgggaggattggtcctcttgagttttacagcagttcccaagcccggtgcttcattgttc 684

                                                                       
Query: 485 agcagacaacataatagcttcatttttccctttatcagactaactattctgctctgtatt 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agcagacaacataatagcttcatttttccctttatcagactaactattctgctctgtatt 744

                                                                       
Query: 545 ttgttaaatttcgagtcatcattggagtaatcctatacctagggatatgttttccctcct 604
           |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 745 ttgttaaatttcgagtcatcatcggagtaatcctatacctagggatatgttctccctcct 804

                                                             
Query: 605 cacaggctgcgcgctgcacgctgctctcttctctgcctctcctttgcagt 654
           |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 805 cacaggctgcgcgctgcatgctgctctcttctctgcctctcctttgcagt 854


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space:   672336
Effective search space used:   672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)