Query= MSMg01no519_g11.b1 MSMg01no519_g11.b1 CHROMAT_FILE:
MSMg01no519_g11.b1 PHD_FILE: MSMg01no519_g11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:06 2005
(647 letters)
>mm_chr13_59208880_59209926
Length = 1047
Score = 787 bits (407), Expect = 0.0
Identities = 413/415 (99%)
Strand = Plus / Plus
Query: 233 cccataagcacttttataaggatgggattctggcccagtaggcagggctctttccccagg 292
|||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 433 cccatatgcacttttataaggatgggattctggcccagcaggcagggctctttccccagg 492
Query: 293 gaacacagacaggacagtcaggctcaagctgactgaggtacagggcacacgggtgctgca 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gaacacagacaggacagtcaggctcaagctgactgaggtacagggcacacgggtgctgca 552
Query: 353 cagaaatatacatgaaagcaaaacattcataagctaaataactaaacatttaaagattgt 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 cagaaatatacatgaaagcaaaacattcataagctaaataactaaacatttaaagattgt 612
Query: 413 tttgtgggtcaacatgtctgataatatgactcctggctggaacccagttgcggatttcaa 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tttgtgggtcaacatgtctgataatatgactcctggctggaacccagttgcggatttcaa 672
Query: 473 aggtctctgcagctggctttgcctgccaagagacattgggatctggggttcataggagag 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 aggtctctgcagctggctttgcctgccaagagacattgggatctggggttcataggagag 732
Query: 533 tacagcaggtgacatgggcacggcctctgaggatatccagggaatagaatacggatgaag 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 tacagcaggtgacatgggcacggcctctgaggatatccagggaatagaatacggatgaag 792
Query: 593 attgcggtgatgggtaccattgcggtttgcacgagcaatgttcccatggggtcat 647
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 attgcggtgatgggtaccattgcggtttgcacgagcaatgttcccatggggtcat 847
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no519_g11.g1 MSMg01no519_g11.g1 CHROMAT_FILE:
MSMg01no519_g11.g1 PHD_FILE: MSMg01no519_g11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:06 2005
(620 letters)
>mm_chr13_59301664_59302681
Length = 1018
Score = 1093 bits (565), Expect = 0.0
Identities = 607/621 (97%), Gaps = 4/621 (0%)
Strand = Plus / Minus
Query: 1 tgctttcccctatgttcagatgacatggagcctcttgttctgggaacctcactctgggaa 60
|||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 818 tgctttccccgatgttcagatgacatcgagcctcttg-tctgggaacctcactctgggaa 760
Query: 61 ctgagctagacctttgttacttccaagaaacagaatgttcttcacttt-tgggacatttt 119
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 759 ctgagctagacctttgttacttccaagaaacagaatgttcttcactttct-ggacatttt 701
Query: 120 ccttcacttggtgacagtaaaggagttacaaatgaggggaccagcagcactcaaccctgt 179
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 700 ccttcacttggtgacagtaaaggagttacaaatga-gggaccagcagcactcaaccctgc 642
Query: 180 ccagtgcaaaaggggtctagatctgtccgtgagagctcacaacatgatggccattgacat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 ccagtgcaaaaggggtctagatctgtccgtgagagctcacaacatgatggccattgacat 582
Query: 240 ccatgggttctgagaacatctcccctttcactgaggccaaatgctttctacacagcccac 299
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 581 ccatgggttctgagaacatctcccgtttcactgaggccaaatgctttctacacaacccac 522
Query: 300 attccacgcccacatagagacaggcagactgagccttctcttctctggtctctatttcaa 359
||||||| |||||||| |||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 521 attccacacccacataaagacaggcagactgagccttctctactctggtctctgtttcaa 462
Query: 360 agacaattaagacagtttataggggtgtgtaaaataaatcagaattcaaagggagacaac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 agacaattaagacagtttataggggtgtgtaaaataaatcagaattcaaagggagacaac 402
Query: 420 tgacagaaagtaagaggaaattgaatgttctgaaatgaacgctgctgaaaggcttggcac 479
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 401 tgacagaaagtaagaggaaattgaatgttctgaaatgagcgctgctgaaaggcttggcac 342
Query: 480 acagctagagaagtcactcacaaatgtagtcagagtgtcctcctgtgaatcagggaactg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 acagctagagaagtcactcacaaatgtagtcagagtgtcctcctgtgaatcagggaactg 282
Query: 540 tgatgaggtccagaaagagcctgaagtctaagcctgtacctgtttctcatgtattgcatc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tgatgaggtccagaaagagcctgaagtctaagcctgtacctgtttctcatgtattgcatc 222
Query: 600 ttattagaaccaggcagatca 620
|||||||||||||||||||||
Sbjct: 221 ttattagaaccaggcagatca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1018
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1008
Effective search space: 614880
Effective search space used: 614880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
