Query= MSMg01no519_p20.b1 MSMg01no519_p20.b1 CHROMAT_FILE:
MSMg01no519_p20.b1 PHD_FILE: MSMg01no519_p20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:53 2005
(634 letters)
>mm_chr13_38072955_38073988
Length = 1034
Score = 1187 bits (614), Expect = 0.0
Identities = 629/634 (99%)
Strand = Plus / Minus
Query: 1 gtgtgatggtaaatgccctaatttcaggactaaaaaggctgaggcagaggaatcacattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 gtgtgatggtaaatgccctaatttcaggactaaaaaggctgaggcagaggaatcacattt 775
Query: 61 tgggagccctcctgcgctctccaaaaccaaacaatagtgaactgaagttagcttccatga 120
|||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 774 tgggagccctcctgggctctccaaaaccaaacaatagtgagctgaagttagcttccatga 715
Query: 121 actcctaggtgaggggtagcctgtgatgttgtctgaggcagggaaggaagatggatctga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 actcctaggtgaggggtagcctgtgatgttgtctgaggcagggaaggaagatggatctga 655
Query: 181 gtgttggtaacactaaacaccaggagaatcccactgttgcagttttcccgaggtgagatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 gtgttggtaacactaaacaccaggagaatcccactgttgcagttttcccgaggtgagatg 595
Query: 241 gcttggttgcttagcaggttgtaaatgggtggtggaggcactctgtcttgttttctggta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 gcttggttgcttagcaggttgtaaatgggtggtggaggcactctgtcttgttttctggta 535
Query: 301 tgtgatatgaggggtatttttcattcatgattctttttctccacctagagtttaaagttt 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 tatgatatgaggggtatttttcattcatgattctttttctccacctagagtttaaagttt 475
Query: 361 tctctggaaaaataaagcattttgacttaggtagtttgagttacatttcttccttaggtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tctctggaaaaataaagcattttgacttaggtagtttgagttacatttcttccttaggtt 415
Query: 421 ttcgcccaccctgaataggcagtaatggtaaatgttggtcttccatagctgagaaagtcg 480
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 414 ttcgcccaccctgaataggcagtaatggtaaatgttcgtcttccatagctgagaaagtcg 355
Query: 481 tgacacacatatgtgattactttttgtttaaacaccatgcttttttctgctgttaaggta 540
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tgacacatatatgtgattactttttgtttaaacaccatgcttttttctgctgttaaggta 295
Query: 541 gttttgaaactattttcccccaaaacaaatgtctgtagagtcttaaagactgctctcgcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gttttgaaactattttcccccaaaacaaatgtctgtagagtcttaaagactgctctcgcc 235
Query: 601 tgcctgctgcctaacccgagccactgttgagaag 634
||||||||||||||||||||||||||||||||||
Sbjct: 234 tgcctgctgcctaacccgagccactgttgagaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no519_p20.g1 MSMg01no519_p20.g1 CHROMAT_FILE:
MSMg01no519_p20.g1 PHD_FILE: MSMg01no519_p20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:53 2005
(660 letters)
>mm_chr13_37884977_37886036
Length = 1060
Score = 1224 bits (633), Expect = 0.0
Identities = 655/665 (98%), Gaps = 5/665 (0%)
Strand = Plus / Plus
Query: 1 acctaaaacacaaattcctgggcccattctagaccaagggaattacttagacagcatgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acctaaaacacaaattcctgggcccattctagaccaagggaattacttagacagcatgga 260
Query: 61 aggcagagacattccagcctattgaaaggttcctgggcatagtgtccatcaatcaggact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggcagagacattccagcctattgaaaggttcctgggcatagtgtccatcaatcaggact 320
Query: 121 tgctactaataatgaaggtggtgtgggctggggttccattgatcactacttatcactcaa 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgctactaattatgaaggtggtgtgggctggggttccattgatcactacttatcactcaa 380
Query: 181 tggaaaatgtcatcagatggaaagttaggtggctgacactcatttagcagtgtgtgaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggaaaatgtcatcagatggaaagttaggtggctgacactcatttagcagtgtgtgaggt 440
Query: 241 gagcaccttgggttttcatagaatgcagtctctcgttcgggaaccattgtaccaaagggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 441 gagcaccttgggttttcatagaatgcagtctctcgttcgggaaccattgtaccgaagggc 500
Query: 301 aggcaggggctcagcaatgtttgattacatgcatagcatctaacctttaatgcatagttc 360
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggcagaggctcagcaatgtttgattacatgcatagcatctaacctttaatgcatagttc 560
Query: 361 tcatgttctctatgaacctcttggttaattgcaaaagaagatggtttagccaaaagggga 420
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcacgttctttatgaacctcttggttaattgcaaaagaagatggtttagccaaaagggga 620
Query: 421 ccaagagagt-----ttgttttttgtttgtttgagacagtggttctttgtgtagccttgg 475
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccaagagagtctactttgttttttgtttgtttgagacagtggttctttgtgtagccttgg 680
Query: 476 ctgtcctagaattagctctgtagaccaggctggcctcgaactcacagagatctgcctacc 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctgtcctagaattagctctgtagaccaggctggcctcgaactcacagagatctgcctacc 740
Query: 536 tctgtctcttgagtgctgggatcaaacgtggacaccaccactgcccagaaagaatcaact 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tctgtctcttgagtgctgggatcaaacgtggacaccaccactgcccagaaagaatcaact 800
Query: 596 tctttttgcttggatttttcatgttgctgaggattgattgatcctagcccctcctgcatg 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tctttttgcttggatttttcatgttgctgaggattgattgatcctagcccctcctgcatg 860
Query: 656 ctagg 660
|||||
Sbjct: 861 ctagg 865
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space: 682500
Effective search space used: 682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
