NAACTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTTTGTATATATGTTCAAGAGATAGCTTGGTCTTGACATAGA
TCTATTCCTGACTTTCTGAGAAACTGTCATACTGATTGTCATAGTGGCTG
TACAAGGTTGCATTGCCACCAGCAGTGGAGGAGTGTTCCTCTTGACCCAC
AGCCTTGCCAGCATGATTCGTCAGTTGTTTTACTGATACTAGCCATACTG
AAAGTTGTAAGATGAAATTTCAAAGTAGTTTTACTTTGCATTTCCCTGAC
AGCTAAGGATAACAAATATTTCCTTAAGTGTTTCTTATTCATATGAATAT
CCTCTGTTGAGAATTCTCTAGATCTGTTCCCCATTTTCCTTATTTGATTA
TTTGGGTGTTTTGATATCTTATCTCTTCAGTTCATTATAATTTTAGATAT
TAGTTGTCACTGGATGTGAATTTTTACCCATTCTGTGGGCACCATTTTTT
CCCCAATTAACAGTGTTTTTTACCTTACAGGAGATTTTCAGGTTCATGAG
ACCCCATTTATTAATTGCTGATTATTGACAGAGCTAAATTTTTTTCTTTT
TTTATATTAGGTATTTTCTTCATTTACATTTCCAAGGCAATCCCAAAAGT
CCCTCATGCCCTACCCACTCCCCACTCCCCTACCCACCCACTACCACTTC
TTTGCCCTGGTGTTCCCCTGTACAGAGGCATAAAAAGTTTGCAAGACCAA
TG

GATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXACAGTTTTGGGGCTGCCTGATAACCACC
AAACCCCAGCAATCTCCTGTCTCCCTCTCTCTTCCCTGGGATAGAGGCAT
GCCATAGGGAGTCACCTACCACGCATGTGAGTTCAGGAATCTGAACTGCT
GTCCGTGTGTTTGTGCTCTTAACCAGAGCCATCCCTCTAGCTCTAAGACC
TACAGTTTCTATCTGATGTTCTGAAAGGAAATGCGGCACTAGATGACTAT
ACAAAACCAATGAGACACTTCTAGTCATGCACAGAGAATACAGCTTACCT
TTTGTGCACCACTTTGAAGTAAATGAGAACATCCCAGCAAAGCAATAAAA
TTAATTAGTAGGGATTTTCAGGTTACCAGCCAAATGAGGATCCAACAGAA
TTGCTGTGCATCTGATGGACTAGACACTGTCAGTGGACCTAGAATGGAAG
GCTCCCAGTTGTCAAATGGGATTGATTGAATGTAACAGAAGCAGGACAGC
ACTGATCTTCTACATTCAACAGGAGTCCTTTCCCAAGTACAACATGTTCC
TATACCACGTTGTTACAATTTAAAGGGAGAAACTTGTTTTAAGAAAAGGA
ATCCATATTAACAAGGAGCTAAAGTAAGCAGTGTTTGGAGATAACCAGGG
CTCTTGAGATGTTATGGATATCATTCTCTCTTGAATTTGGAGGGTTCTTG
ACACCTAAAGAG

Query= MSMg01no520_k05.g1 MSMg01no520_k05.g1 CHROMAT_FILE:
MSMg01no520_k05.g1 PHD_FILE: MSMg01no520_k05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:44 2005
         (690 letters)



>mm_chr13_7238540_7239634
          Length = 1095

 Score = 1201 bits (621), Expect = 0.0
 Identities = 675/695 (97%), Gaps = 5/695 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   acagttttggggctgcctgataaccaccaaaccccagcaatctcctgtctccctctctct 60
           |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 acagttttggggttgcctgataaccaccaaaccccagcaatctcctgtctccttctctct 260

                                                                       
Query: 61  tccctgggatagaggcatgccatagggagtcacctaccacgcatgtgagttcaggaatct 120
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 tccctgggatagaggcatgccatagggagacacctaccacgcatgtgagttcaggaatct 320

                                                                       
Query: 121 gaactgctgtccgtgtgtttgtgctcttaac--cagagccatccctctagctctaagacc 178
           ||||||| |||| ||||||||||||||||||  |||||||||| ||||||||||||||||
Sbjct: 321 gaactgccgtccctgtgtttgtgctcttaaccacagagccatctctctagctctaagacc 380

                                                                       
Query: 179 tacagtttctatctgatgttctgaaaggaaatgcggcactagatgactatacaaaaccaa 238
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 tacagtttctatctgatgttctgaaaggaaatgcggcactagatgactatacaaaatcaa 440

                                                                       
Query: 239 tgagacacttctagtcatgcacagagaatacagcttaccttttgtgcaccactttgaagt 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgagacacttctagtcatgcacagagaatacagcttaccttttgtgcaccactttgaagt 500

                                                                       
Query: 299 aaatgagaacatcccagcaaagcaataaaattaattagtagggattttcaggttaccagc 358
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 aaatgagaacatcccagcaaagcaataaaattaattagtaggaattttcaggttaccagc 560

                                                                       
Query: 359 caaatgaggatccaacagaattgctgtgcatctgatggactagacactgtcagtggacct 418
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 561 caaatgaggatccaacagaattgctgtgtatctgatggactagacactgtcagtggacct 620

                                                                       
Query: 419 agaatggaaggctcccagttgtcaaatgggattgattgaatgtaacagaagcaggacagc 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 621 agaatggaaggctcccagttgtcaaatgggattgattgaatgtaacagaagcaggacagt 680

                                                                       
Query: 479 actgatcttctacattcaacaggagtcctttcccaagtacaaca---tgttcctatacca 535
           |||||||||||||||||||||||||||||||||||| |||||||   | |||||||||||
Sbjct: 681 actgatcttctacattcaacaggagtcctttcccaaatacaacaacatattcctatacca 740

                                                                       
Query: 536 cgttgttacaatttaaagggagaaacttgttttaagaaaaggaatccatattaacaagga 595
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgttgttacaatttaaagggagaaacttgttttaagaaaaggaatccatattaacaagga 800

                                                                       
Query: 596 gctaaagtaagcagtgtttggagataaccagggctcttgagatgttatggatatcattct 655
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gctaaagtaagcagtgtttggagataaccagggctcttgagatgttatggatatcattct 860

                                              
Query: 656 ctcttgaatttggagggttcttgacacctaaagag 690
           |||| ||||||| ||||||||||||||||||||||
Sbjct: 861 ctctggaatttgtagggttcttgacacctaaagag 895


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1095
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1085
Effective search space:   737800
Effective search space used:   737800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)