Query= MSMg01no521_j23.b1 MSMg01no521_j23.b1 CHROMAT_FILE:
MSMg01no521_j23.b1 PHD_FILE: MSMg01no521_j23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:00 2005
(499 letters)
>mm_chr13_90866831_90867729
Length = 899
Score = 919 bits (475), Expect = 0.0
Identities = 490/495 (98%)
Strand = Plus / Plus
Query: 5 gaattctttgtaaagatgaatctcttctaagatcctgtactgcaagatgtgtgtatcctt 64
|||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttgtaaagaagaatttcttctaagatcctgtactgcaagatgtgtgtatcctt 264
Query: 65 gctgctcacatcccttaaacacaaccagtcaccaaaaaagaaggaaatgtgtctcaagtt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gctgctcacatcccttaaacacaaccagtcaccaaaaaagaaggaaatgtgtctcaagtt 324
Query: 125 atagggtcacatgctcagcgaccctcagattcccaaatataaggaaagggctggatgact 184
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 325 atagggtcacatgctcagcgaccctcagattcccaaatataaggaaagggcaggatgact 384
Query: 185 agataccagaagacagctaacaaagtagcctaacactgaaaaagacaacatatgtaaaga 244
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 385 agataccagaagacagctaacaaagtagcctaacactgaaaaagacaacacatgtagaga 444
Query: 245 acaaatacgggaataaacgatgagagaatctgatgagtagttttgagggaaaaacaaatc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acaaatacgggaataaacgatgagagaatctgatgagtagttttgagggaaaaacaaatc 504
Query: 305 caatgaactaggaagaagaaaccagaaatccatacaggaattgggggaaagaatcataac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 caatgaactaggaagaagaaaccagaaatccatacaggaattgggggaaagaatcataac 564
Query: 365 ttgattatgttaaatgtgctcctattttataggtactgataacatatctcgcagatttaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttgattatgttaaatgtgctcctattttataggtactgataacatatctcgcagatttaa 624
Query: 425 aaacatgagccttagacataacagtccctgagcgtcttaacctctgagctataaattagt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaacatgagccttagacataacagtccctgagcgtcttaacctctgagctataaattagt 684
Query: 485 agatacacatcagct 499
|||||||||||||||
Sbjct: 685 agatacacatcagct 699
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space: 434721
Effective search space used: 434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_j23.g1 MSMg01no521_j23.g1 CHROMAT_FILE:
MSMg01no521_j23.g1 PHD_FILE: MSMg01no521_j23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:00 2005
(609 letters)
>mm_chr13_91001630_91002641
Length = 1012
Score = 963 bits (498), Expect = 0.0
Identities = 533/546 (97%), Gaps = 3/546 (0%)
Strand = Plus / Minus
Query: 67 atatatgtatattggatattagtcccctatctgatttaggataggtaaagatcctttccc 126
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979 atatatatatattggatattagtcccctatctgatttaggataggtaaagatcctttccc 920
Query: 127 aatctgttgttggcctttttgtcttattgacagtgtcttttgccttacagaagctttgca 186
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 919 aatctgttgttggcctttttgtcttgttgacagtgtcttttgccttacagaagctttgca 860
Query: 187 gtctcatgtcactcctactttctaattgattttatttacaagagccttccatgccactgg 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 gtctcatgtcactcctactttctaattgattttatttacaagagccttccatgccactgg 800
Query: 247 agtaggggacataccattgcctgtattgggtgtcaagaaggacatgagctggtgtggaga 306
| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 799 aataggggacataccattgtctgtattgggtgtcaagaaggatgtgagctggtgtggaga 740
Query: 307 attttgaggagttttggggagatgtccagtttcttgaacataaggtgttatctttcatca 366
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 739 attttgaggagttttggggagatgtccagattcttgaacataaggtgttatctttcatca 680
Query: 367 gttgcattcagtcaagcaacacggctgtagaactcatgataactggatgtattcttcatc 426
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gttgcattcagtcaagcaacatggctgtagaactcatgataactggatgtattcttcatc 620
Query: 427 tttcactagcaaccagggtcaggggtgaattacagtaagaaataaacttgcaagga---c 483
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 619 tttcactagcaaccagggtcaggggtgaattacagtaagaaataaacttgcaaggacttc 560
Query: 484 ttcttatcaacaaggtagtttaaaacatttgcattgaggctacagtttatataccccttc 543
|||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 559 ttcttatccacaaggtagtttaaaacatttgcactgaggctacagtttatataccccttc 500
Query: 544 tttatcagagtacacatctgtaatggatgcaccaacctttcccacactggtgtcattcct 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tttatcagagtacacatctgtaatggatgcaccaacctttcccacactggtgtcattcct 440
Query: 604 ggaaga 609
||||||
Sbjct: 439 ggaaga 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1012
Length adjustment: 10
Effective length of query: 599
Effective length of database: 1002
Effective search space: 600198
Effective search space used: 600198
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
