Query= MSMg01no523_a11.b1 MSMg01no523_a11.b1 CHROMAT_FILE:
MSMg01no523_a11.b1 PHD_FILE: MSMg01no523_a11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:49 2005
(348 letters)
>mm_chr13_119683775_119684523
Length = 749
Score = 648 bits (335), Expect = 0.0
Identities = 344/347 (99%), Gaps = 1/347 (0%)
Strand = Plus / Plus
Query: 3 gaattctcttatccaa-tttttgctcttgcttcagttcagttctcaattctccacctttg 61
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattctcttaaccaaatttttgctcttgcttcagttcagttctcaattctccacctttg 262
Query: 62 caagtcacgtaagacgaacgtgctatgtaatgcctcatgggaaattccaattagagtgaa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 caagtcacgtaagacgaacgtgctatgtaatgcctcatgggaaattccaattagagtgaa 322
Query: 122 aggtaatatcgaaagctttgtgactacagcactctatgcctggaagaactaataccactt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aggtaatatcgaaagctttgtgactacagcactctatgcctggaagaactaataccactt 382
Query: 182 taaaaggaagcatatgtaattactattcatttaaaggtacatatacattatcatcaagtc 241
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 383 taaaaggaagcatatgtaattactattcatttaaaggtacatatacactatcatcaagtc 442
Query: 242 tcccaaaccaatatgtaatgtgatttttctagttctgtaagagaaaagtaattaataaat 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tcccaaaccaatatgtaatgtgatttttctagttctgtaagagaaaagtaattaataaat 502
Query: 302 taattttatgtatttgtcctgagctagccatacaatctctgtgtact 348
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 taattttatgtatttgtcctgagctagccatacaatctctgtgtact 549
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 749
Length adjustment: 9
Effective length of query: 339
Effective length of database: 740
Effective search space: 250860
Effective search space used: 250860
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no523_a11.g1 MSMg01no523_a11.g1 CHROMAT_FILE:
MSMg01no523_a11.g1 PHD_FILE: MSMg01no523_a11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:49 2005
(601 letters)
>mm_chr13_119734364_119735364
Length = 1001
Score = 1089 bits (563), Expect = 0.0
Identities = 563/563 (100%)
Strand = Plus / Minus
Query: 39 attaagtacacgccagataaatacatgtctttatatgtgatttaaatgtgcttcaccttg 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1001 attaagtacacgccagataaatacatgtctttatatgtgatttaaatgtgcttcaccttg 942
Query: 99 aaagatagatttcagaagtgtgtttaaattttttatttttagataattagggttttatag 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 aaagatagatttcagaagtgtgtttaaattttttatttttagataattagggttttatag 882
Query: 159 aagagttgaaaaataatacagaatttccaaataatttttccctctggcttccccttatac 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 aagagttgaaaaataatacagaatttccaaataatttttccctctggcttccccttatac 822
Query: 219 tcacgttttaggtaattccaggactcttaccaaaaccagaaagttaaccttggcacaaga 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 tcacgttttaggtaattccaggactcttaccaaaaccagaaagttaaccttggcacaaga 762
Query: 279 ttataattaaacttcccaattttctcatatttaattagcttttaaaaataattttctatt 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 ttataattaaacttcccaattttctcatatttaattagcttttaaaaataattttctatt 702
Query: 339 tctattctaggattcactcatagaggaaaaaactttatgatttttgtagacactccattt 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 tctattctaggattcactcatagaggaaaaaactttatgatttttgtagacactccattt 642
Query: 399 ttatttaaagttctgcttatcaatttaagggtttttgtctttaacaatggttcttgagac 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 ttatttaaagttctgcttatcaatttaagggtttttgtctttaacaatggttcttgagac 582
Query: 459 ctggttagtgatattcttatttcctagttcctccaacatttattagttagaactctatta 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ctggttagtgatattcttatttcctagttcctccaacatttattagttagaactctatta 522
Query: 519 agagttattgttcatcactctttttctaagacagggtcttactatgtagctctggctgtc 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 agagttattgttcatcactctttttctaagacagggtcttactatgtagctctggctgtc 462
Query: 579 ctggaactcacaatgaggaccag 601
|||||||||||||||||||||||
Sbjct: 461 ctggaactcacaatgaggaccag 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1001
Length adjustment: 10
Effective length of query: 591
Effective length of database: 991
Effective search space: 585681
Effective search space used: 585681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
