NNNTTCCAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTCTGCTTAGCTCTGTACTCCATTTTAAAATTGGGTTATT
TGGTTTTCTGGAGTCTAACACACACACACACACACACACACACACACAAA
CACACACACACACACACACACATATATATATATATATATATCACACATAT
ATGTGTGTATCTATGTATATATAACTTGGATACTGGCCCTCTGTCAGATG
TATGGTTAGTGAAGATTTTTTCCCTAGTCTGTGGGCTGTATTTTGTACTG
TTGAGAGTGTCCCTTGCCTTACAGAAGCTTCTCATGAAATGGCATTTATC
AGTTGTTGACATTAGGGCCTGAGACATTAGTGTTCTGATCAGGAAATTTG
TCTTCTGTATCAATGCATTAAAAGCTATGTCCCAAATTCTGTTCTATTAG
CTAAAATATTAGGTTTTATTTTAAGGTCCTTGATCCATTTGGGCTTGAGT
TTTATGGAAGATGCTAAATATGAATCTTTTTGCATTCTTCTATGTGGAGA
CATCCAGTTAAACCAGAACCAATTGTTAAAAGTGCATTTTTTCTATTTTA
TGATTTTGGCTTCATTGTCAAAAAATCAAGTGGCCATAGGTGTGTGTCTA
TTTCTGAATCTTCAGTTCTAATTGCTCAACTTGTCTGTTTCTATACTGAT
ATAATGCAGTTATCATTATTATTGCTCTGCAGTATAGCTTAAAGTCAG

NTTCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTATTCCTCAGTGTTGGGGAA
TGCCAGGGCCAGGAAGTGGGAGTTGGTTGCTTGGCCAGCAGGGGGTTGGG
GAAAGGGAGTGAGGGAAGGTGTTTTTCAGAGGTGAAACCAGGAACATGGT
TTATATGTTTATACATGGAATGTATATAAAGAAAATATCCAATAAAAAAA
TCAGAAAAAATCAATAGAGCTGCAATGAAAATGGATGAATATATTTCTGT
AGTAATATATTAAATCATTTGGTTATATGCTCCAGAGTGGTAGCTGGATC
ATATCGTAGATATATTTCTCATGTCTTGACAAATACCTAAACTGATTTCC
AGAGTGGTCCCACTGGTTCCCACTCTCTTCAACAGTGTATAGGTATTCTT
CCAGGGCAGTACTTTATGCATTCTATCTCTAGTTTCCCTGGTTAGCTAGT
TTTAGGCACCATTTCTGCATAATTTCTTGTAAAAGGTTTGCCACATAGAC
TTATTACATTCGTTTCTCTTCTCATATAAATTTTAATTTCTGATTTGCTT
TCCTCTTCTTTTCCTTAATGTTTACCAGTTTCTTCTGTTAAGAATCTCTA
ATTTGAGATAAGCCTCTTCAATGGATCTAGAAGGCTTTTAATATCAGTTT
CCTCTGTCAGACTGGTCAAAAAAAAAAAAAAAAACCCTGATATTATN

Query= MSMg01no523_f06.g1 MSMg01no523_f06.g1 CHROMAT_FILE:
MSMg01no523_f06.g1 PHD_FILE: MSMg01no523_f06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:12 2005
         (618 letters)



>mm_chr13_80423834_80424851
          Length = 1018

 Score =  832 bits (430), Expect = 0.0
 Identities = 439/442 (99%)
 Strand = Plus / Minus

                                                                        
Query: 177  aaaaaatcaatagagctgcaatgaaaatggatgaatatatttctgtagtaatatattaaa 236
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 aaaaaatcaatagagctgcaatgaaaatggatgaatatatttctgtagtaatatattaaa 956

                                                                        
Query: 237  tcatttggttatatgctccagagtggtagctggatcatatcgtagatatatttctcatgt 296
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 955  tcatttggttatatgctccggagtggtagctggatcatatcgtagatatatttctcatgt 896

                                                                        
Query: 297  cttgacaaatacctaaactgatttccagagtggtcccactggttcccactctcttcaaca 356
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895  cttgacaaatacctaaactgatttccagagtggtcccactggttcccactctcttcaaca 836

                                                                        
Query: 357  gtgtataggtattcttccagggcagtactttatgcattctatctctagtttccctggtta 416
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 835  gtgtataggtattcttccagggcagtactatatgcattctatctctagtttccctggtta 776

                                                                        
Query: 417  gctagttttaggcaccatttctgcataatttcttgtaaaaggtttgccacatagacttat 476
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 775  gctagttttaggcaccatttctgcataatttcttgtaaaagttttgccacatagacttat 716

                                                                        
Query: 477  tacattcgtttctcttctcatataaattttaatttctgatttgctttcctcttcttttcc 536
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715  tacattcgtttctcttctcatataaattttaatttctgatttgctttcctcttcttttcc 656

                                                                        
Query: 537  ttaatgtttaccagtttcttctgttaagaatctctaatttgagataagcctcttcaatgg 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655  ttaatgtttaccagtttcttctgttaagaatctctaatttgagataagcctcttcaatgg 596

                                  
Query: 597  atctagaaggcttttaatatca 618
            ||||||||||||||||||||||
Sbjct: 595  atctagaaggcttttaatatca 574


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space:   612864
Effective search space used:   612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)