Query= MSMg01no523_h08.b1 MSMg01no523_h08.b1 CHROMAT_FILE:
MSMg01no523_h08.b1 PHD_FILE: MSMg01no523_h08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:22 2005
(550 letters)
>mm_chr13_64566397_64567346
Length = 950
Score = 1015 bits (525), Expect = 0.0
Identities = 543/555 (97%), Gaps = 12/555 (2%)
Strand = Plus / Plus
Query: 1 ggactgaggctggagccggatgatcagaaatagcaaagcacacggtcctctgccgtctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggactgaggctggagccggatgatcagaaatagcaaagcacacggtcctctgccgtctca 260
Query: 61 gtgcactcagggagacttaatccccagcagatgccagccagcctcgctttcagattagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgcactcagggagacttaatccccagcagatgccagccagcctcgctttcagattagcc 320
Query: 121 tggagaagcttctgggaagcttccagctcagcgcgctgcttttcctcgatgatctctgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggagaagcttctgggaagcttccagctcagcgcgctgcttttcctcgatgatctctgct 380
Query: 181 caccctttccatttgctccataagctcaggagtgaagtgagcccttcaaatgcatggctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caccctttccatttgctccataagctcaggagtgaagtgagcccttcaaatgcatggctt 440
Query: 241 caatggcaaaatggtctaaaatggaagtgttggggtaaataaggctctggggacagacgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caatggcaaaatggtctaaaatggaagtgttggggtaaataaggctctggggacagacgg 500
Query: 301 ggtgtccttaagacttttgtttcaaaacaaaacaaaacaaaacaaaacaaaacaaaacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggtgtccttaagacttttgtttcaaaacaaaacaaaacaaaacaaaacaaaacaaaacaa 560
Query: 361 aacaacccaaaccccatccaaaaccactagtcttcttttgagagtatccatcttccttga 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 -----cccaaaccccatccaaaaccactagtcttcttttgagagtatccatcttccttga 615
Query: 421 aaagatagacaaactgaaaggattagaagtggccagagtggtcccatacctctttgaagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 aaagatagacaaactgaaaggattagaagtggccagagtggtcccatacctctttgaagg 675
Query: 481 gtgtgatttctgaccacagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt------ag 534
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 676 gtgtgatttctgaccacagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtag 735
Query: 535 aggaagagggtgttg 549
|||| ||||||||||
Sbjct: 736 agga-gagggtgttg 749
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 63
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space: 507600
Effective search space used: 507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no523_h08.g1 MSMg01no523_h08.g1 CHROMAT_FILE:
MSMg01no523_h08.g1 PHD_FILE: MSMg01no523_h08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:22 2005
(667 letters)
>mm_chr13_64621068_64622134
Length = 1067
Score = 1083 bits (560), Expect = 0.0
Identities = 560/560 (100%)
Strand = Plus / Minus
Query: 1 agaagtgaagttttgatttattattattgctttaccatttgacaaatctataatcaaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agaagtgaagttttgatttattattattgctttaccatttgacaaatctataatcaaaca 501
Query: 61 ctagcaagcatgaacaagttcacctgttcttggaggattagaagtacataaaaccaaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctagcaagcatgaacaagttcacctgttcttggaggattagaagtacataaaaccaaact 441
Query: 121 taaaaacatagttttaacacttgtaagtaaacttgactgatgtgacataagagccactgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 taaaaacatagttttaacacttgtaagtaaacttgactgatgtgacataagagccactgc 381
Query: 181 ttctgagagtccccagcactttctttcttgtgtttttggaaagatcaacccaggactcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttctgagagtccccagcactttctttcttgtgtttttggaaagatcaacccaggactcaa 321
Query: 241 atttgtgagcattccttctacctctgacaagatctagaagctggaaaagggggaaaattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atttgtgagcattccttctacctctgacaagatctagaagctggaaaagggggaaaattc 261
Query: 301 tttacaacactaaaaagcaaaatgtcgaaactattttttgatatctaaatatgtctaggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tttacaacactaaaaagcaaaatgtcgaaactattttttgatatctaaatatgtctaggt 201
Query: 361 actggtcaaagcaatgagaataagtaactgcttacacctcagccacaaatgggtgtctag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 actggtcaaagcaatgagaataagtaactgcttacacctcagccacaaatgggtgtctag 141
Query: 421 acaatgtcctccaaatgtagagaatattctggaaaacagaatagaaatcatgtaagagtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 acaatgtcctccaaatgtagagaatattctggaaaacagaatagaaatcatgtaagagtc 81
Query: 481 agataaagtgtgagtggagtaaaacactgtcttccaagtgtcatatccctattgagcacg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 agataaagtgtgagtggagtaaaacactgtcttccaagtgtcatatccctattgagcacg 21
Query: 541 gaagctgtgattacccgcac 560
||||||||||||||||||||
Sbjct: 20 gaagctgtgattacccgcac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space: 694449
Effective search space used: 694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
