XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACTTCT
CTATTCATCTCCTTACATCTGTTTCTACTAACGTGCTACTGCTGCCTGTG
GTCACATTATGTAAAAACCTCCAGTTTTACAGATAGCAGCATCCCAGGAA
AGAAAGGTTCAGAATCTTGCTCCAACTCACCAAAGTTCTAGCCCAGGAGA
TTTTGCAAAGAATTAACTAAACCATCCATACCATAGTATAAAGTTCAAAA
TTTTGACTCTGTTAACATAATGGCTACAACAACAACAACAACATTTATTT
ATTTATTTACTTATTTATTTTTGTATCCTAAAGAAAATCTTGAGATATGC
AAAATATAATCAGAACCTAAATTTTAAGAGATTTAAAAGTGTTTGATTGT
TGTTCATATTTTAAAAATAATTTGTTTAAACATTTTTACATATACTTATT
ATCTACTTACTCTAATGAATACATGCGTATATGCACTTGCCATGCACATG
TAGAAAAGTCAGGAGAAAACTTGCAAGAGTCAGTTCTTTCCTTCTGCCAT
GTGGGTCCCAAAGTTGAGTTCGGGCTAGACACGTCAGCAGATACATTCAA
CCACTGAGAGTTGCAGGCCCTGGTTGTTGGTTTTAAACTGTGTGACATAA
ACTTTCTCCCCTGTGAAGAGTTGGTAATTGGGTCTTTGGGTCTTCTGGAA
CAAACTAACAATGGACTGGCTAGGCTAACAGGAGATGAGATACTAGCGTT
CAGAATCTCAAGTACTCGGGG

TTTTTTTTTTTTTTGTTGTNNNNNNNTTATTTCNTATAATTGNTGGNCAT
TTATTTTTTTTTTTTTTTTGTATTTTTNTTTTTTTTTTTTTTTTTTTTTC
TTGNNTGTTTTTTTTTTTGTTATTTTTTTTTTTNTTTNGGNATTTANTNN
NTTGTTNCTTTCTTTTCCGNCTNTNTATNNNNNNNNNNNCCGCTAAATTA
CCTAAATGGGGGTTAAAGNCCCTTGGGNCGGGNCTCGGCCCCCTTTGGGN
CCCCGGNTTTTTTTTTTACCAATTTTTTTTAAGGTTGGAACCACTTTATT
AGAAAAGAATCCGTTGTGCATTTCATTTTAGNAAATCCTATGGTAATTCT
GTTGTGCTTAAAAAATCTTCTTTATCTTTGGAAGAAGGAGGTTCACTTGG
AACCTTTTACTTTAAAAAAATTTAAATTGGGGGGAAAAAAATCAATTTTT
TTTTTTATGGAAAAAATGGGCCCTTTTGTTTTGTTTTTAAAACAAAAATT
TTTTTTTTTTTAAAAAAACCCCCCCCCCCCTTTTTAAAAAAAATAATATG
TGGGGGCGAAATAATCCCCAATTTTTTTTTTTTTTTTCCCCTTCTTTTTT
GNAGGGGGGGTGTTTTTTTTATAAAAAAAAAAAAAAAAAANANNNTTTNA
TTTTTTATTNTTTTTTTTGTTTTAGATNATTTTTTNNTNCTTATTTTTTT
ATTTTNNNNNTGNNNTGNTTTTTGTTTTTGTNGTTNNNNNTTTTTTTTTT
TTTTTTTTAAAAAAAAAAAACTTATTTAA

Query= MSMg01no524_k03.b1 MSMg01no524_k03.b1 CHROMAT_FILE:
MSMg01no524_k03.b1 PHD_FILE: MSMg01no524_k03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:58 2005
         (700 letters)



>mm_chr13_119447529_119448628
          Length = 1100

 Score = 1346 bits (696), Expect = 0.0
 Identities = 696/696 (100%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcacttctctattcatctccttacatctgtttctactaacgtgctactgctgcctg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 gaattcacttctctattcatctccttacatctgtttctactaacgtgctactgctgcctg 862

                                                                       
Query: 65  tggtcacattatgtaaaaacctccagttttacagatagcagcatcccaggaaagaaaggt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 tggtcacattatgtaaaaacctccagttttacagatagcagcatcccaggaaagaaaggt 802

                                                                       
Query: 125 tcagaatcttgctccaactcaccaaagttctagcccaggagattttgcaaagaattaact 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tcagaatcttgctccaactcaccaaagttctagcccaggagattttgcaaagaattaact 742

                                                                       
Query: 185 aaaccatccataccatagtataaagttcaaaattttgactctgttaacataatggctaca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaaccatccataccatagtataaagttcaaaattttgactctgttaacataatggctaca 682

                                                                       
Query: 245 acaacaacaacaacatttatttatttatttacttatttatttttgtatcctaaagaaaat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acaacaacaacaacatttatttatttatttacttatttatttttgtatcctaaagaaaat 622

                                                                       
Query: 305 cttgagatatgcaaaatataatcagaacctaaattttaagagatttaaaagtgtttgatt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cttgagatatgcaaaatataatcagaacctaaattttaagagatttaaaagtgtttgatt 562

                                                                       
Query: 365 gttgttcatattttaaaaataatttgtttaaacatttttacatatacttattatctactt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gttgttcatattttaaaaataatttgtttaaacatttttacatatacttattatctactt 502

                                                                       
Query: 425 actctaatgaatacatgcgtatatgcacttgccatgcacatgtagaaaagtcaggagaaa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actctaatgaatacatgcgtatatgcacttgccatgcacatgtagaaaagtcaggagaaa 442

                                                                       
Query: 485 acttgcaagagtcagttctttccttctgccatgtgggtcccaaagttgagttcgggctag 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acttgcaagagtcagttctttccttctgccatgtgggtcccaaagttgagttcgggctag 382

                                                                       
Query: 545 acacgtcagcagatacattcaaccactgagagttgcaggccctggttgttggttttaaac 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acacgtcagcagatacattcaaccactgagagttgcaggccctggttgttggttttaaac 322

                                                                       
Query: 605 tgtgtgacataaactttctcccctgtgaagagttggtaattgggtctttgggtcttctgg 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgtgacataaactttctcccctgtgaagagttggtaattgggtctttgggtcttctgg 262

                                               
Query: 665 aacaaactaacaatggactggctaggctaacaggag 700
           ||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacaaactaacaatggactggctaggctaacaggag 226


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 700
Length of database: 1100
Length adjustment: 10
Effective length of query: 690
Effective length of database: 1090
Effective search space:   752100
Effective search space used:   752100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)