Query= MSMg01no524_l22.b1 MSMg01no524_l22.b1 CHROMAT_FILE:
MSMg01no524_l22.b1 PHD_FILE: MSMg01no524_l22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:06 2005
(579 letters)
>mm_chr13_46781348_46782326
Length = 979
Score = 1091 bits (564), Expect = 0.0
Identities = 573/576 (99%)
Strand = Plus / Minus
Query: 4 ggaattcagaacaaaccaaagatgagagctccaagccgacattcagcttcagtgtggcaa 63
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 ggaattcagagcaaaccaaagatgagagctccaagccgacattcagcttcagtgtggcaa 720
Query: 64 aaccatctgggaaggagtctgagcagctagccaaggctacttttgcatttggaaatcaaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 aaccatctgggaaggagtctgagcagctagccaaggctacttttgcatttggaaatcaaa 660
Query: 124 ccaatacaacaactggtaaatagtaaaagactttttttctcaagttgtatttgatacctt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 ccaatacaacaactggtaaatagtaaaagactttttttctcaagttgtatttgatacctt 600
Query: 184 gacaaatgcaggaagtcaaggagttgctgcctgaaaataatggagagtatttgtttcaaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 gacaaatgcaggaagtcaaggagttgctgcctgaaaataatggagagtatttgtttcaaa 540
Query: 244 gtttttaagagctcactcaggcttttctgttttaactgaaagaaattcccatgattctga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 gtttttaagagctcactcaggcttttctgttttaactgaaagaaattcccatgattctga 480
Query: 304 tgaaatatctacagatccaattttgagaaatgcagctgtaacagaaagtacacaatgggg 363
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tgaaatatctacagacccaattttgagaaatgcagctgtaacagaaagtacacaatgggg 420
Query: 364 catattatatatgtctttctgtcctttggacattttataattagaattgatgcatactgt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 catattatatatgtctttctgtcctttggacattttataattagaattgatgcatactgt 360
Query: 424 cagggaaaatacgttttaggtaaatttttatttacaaattatggataatgagtcatcaaa 483
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 cagggaaaataagttttaggtaaatttttatttacaaattatggataatgagtcatcaaa 300
Query: 484 catgtaaggaacattggcagtgaatataattcaattctaagaaaacaggatcatttgaaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 catgtaaggaacattggcagtgaatataattcaattctaagaaaacaggatcatttgaaa 240
Query: 544 actaaaatagaggtggggaacaacctcattaaaaag 579
||||||||||||||||||||||||||||||||||||
Sbjct: 239 actaaaatagaggtggggaacaacctcattaaaaag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space: 551361
Effective search space used: 551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no524_l22.g1 MSMg01no524_l22.g1 CHROMAT_FILE:
MSMg01no524_l22.g1 PHD_FILE: MSMg01no524_l22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:06 2005
(598 letters)
>mm_chr13_46639451_46640443
Length = 993
Score = 1102 bits (570), Expect = 0.0
Identities = 589/598 (98%), Gaps = 5/598 (0%)
Strand = Plus / Plus
Query: 1 ttaaggaaggagtaaatccaccaatttactgccagttttgggaggtaatcactggagata 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaaggaaggagtaaatccaccaatttactgccagttttgggaggtaatcactgg----- 255
Query: 61 caaccagctgagctcagtcggagacaagatacttctgtgaccctgactgtaagtatttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 caaccagctgagctcagtcggagacaagatacttctgtgaccctgactgtaagtatttcc 315
Query: 121 aactgaaggtcagagttataaaaagaactcaaattttgtttggtttctcggtttggcctg 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 316 aactgaaggtcagagttataaaaagaaatcaaattttgtttggtttctcggtttggcctg 375
Query: 181 gggtttggcatgataatcacacacgcacatacagatacacacacacgcaatcagtgttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gggtttggcatgataatcacacacgcacatacagatacacacacacgcaatcagtgttca 435
Query: 241 aaagcatagctattagacaaaagcaaacactggagcccggaagcaaatgttacaaaatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 aaagcatagctattagacaaaagcaaacactggagcccggaagcaaatgttacaaaatta 495
Query: 301 aatttttagctaggggttccctgtgtatttccaataatcaaatctccctggtttcatgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 496 aatttttagctaggggttccctgtgtatttccaataatcaaatctccctggcttcatgag 555
Query: 361 accatcactgcgtgtgtatttctatcatggtaaacatctaggagagaatggaaaaaccca 420
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 accatcgctgcgtgtgtatttctatcatggtaaacatctaggagagaatggaaaaaccca 615
Query: 421 gtagattgtctcaacacatccaaatacggatgtcttagtcaactcaggagtcatttgtca 480
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 616 gtagattgtctcaacacatccaaatacggatgtcttagacaactcaggagtcatttgtca 675
Query: 481 cactccctcatggaagccacggatggtgtgtgccaggccagaggcggggctaccctgtaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 cactccctcatggaagccacggatggtgtgtgccaggccagaggcggggctaccctgtaa 735
Query: 541 gcattgtgcagatggcgttgagcttttaggtgggtaccagagctggaggatgctgaag 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 gcattgtgcagatggcgttgagcttttaggtgggtaccagagctggaggatgctgaag 793
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 993
Length adjustment: 10
Effective length of query: 588
Effective length of database: 983
Effective search space: 578004
Effective search space used: 578004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
